Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1511 232 8e-56 seq1289 134 2e-26 seq1222 89.7 7e-13 >seq1511 Length=901688 Score = 232 bits (256), Expect = 8e-56 Identities = 453/663 (68%), Gaps = 15/663 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||||||||| | || || || || ||||| || |||||||| || |||||| Sbjct 84167 TCAAAGTCTTCACCACCGAGATGGGTGTCGCCGGCGGTAGCCTTGACTTCGAAAATACCT 84108 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| ||| | || | || ||||| || || || || || || || || ||||| ||| Sbjct 84107 TCTTCGATGGTCAAGAGGGAGACATCGAAAGTTCCTCCTCCGAGATCGAAGATGAGAACG 84048 Query 7577 TT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || ||| ||| | | ||||| |||||||| || ||||| || || || || || || Sbjct 84047 TTGCGT-TCGCCCTGGACCTTCTTGTCGAGACCATAGGCGATGGCAGCGGCGGTGGGCTC 83989 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| || ||| || |||| || | ||||| || || || || || Sbjct 83988 GTTGATGATACGGAGGACGTTGAGACCAGAGATCACACCGGCATCCTTGGTGGCCTGACG 83929 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| ||||| ||||| |||||||| || | |||||||| ||| || | ||||| Sbjct 83928 CTGCGAGTCGTTGAAGTAAGCCGGGACGGTGATGACCGCGTTGTTGATGGTCGTTCCGAG 83869 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 ||| ||||| || | || ||||| ||| || ||||| || || ||||| || | || Sbjct 83868 ATAAGATTCGGCAGTTTCCTTCATCTTGAGGAGGACCATGGACGAGATCTCCTCGGGCGT 83809 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||| || || || || | || || || | || || || || | | Sbjct 83808 AAAGATCTTGGTCTCGCCTCGGTATTCGACGCTGATAACCGGCTT----GCCGCCCTTGT 83753 Query 7876 GAT-AACCTTATACGACCAATCTTTCATATCGTCTTGGACCT--GTTGGTCCGAAAACTT 7932 | |||||| | | | | || | ||| |||||||| | ||| || Sbjct 83752 TTTCAACCTTGAAGGGGAAGTGCTTGAGATCCGATTGGACCTCGCATCGTC---GAAGCG 83696 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 | ||| |||||||| || || || || || ||||| |||||||| || |||||| Sbjct 83695 GCGTCCAATAAGACGTTTGGCGTCGAACACGGTGTTCACCGGGTTCATCGCGACTTGGTT 83636 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 |||||| || || ||||| ||||| || | | |||| || | || ||||| || || Sbjct 83635 CTTCGCAGCATCTCCGATGAGACGCTC---AGTGTCCGAGAAGGACACATACGAAGGAGT 83579 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 ||| || || || |||||||| ||||| |||||||| ||||| |||||||| || || || Sbjct 83578 CGTGCGGTTACCCTGGTCGTTGGCAATGATTTCTACACGGTCATTTTGCCATACTCCAAC 83519 Query 8113 GCA 8115 ||| Sbjct 83518 GCA 83516 >seq1289 Length=1058660 Score = 134 bits (148), Expect = 2e-26 Identities = 264/385 (69%), Gaps = 4/385 (1%) Strand=Plus/Minus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| |||||||| || || | || | |||||| | |||||| || | | |||| Sbjct 584414 GTACGCTTGGCGCGCTCGCAAGCGCTACGCAGACGACGGATGGCACGAGGATCATCGGAG 584355 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 ||||| | || ||| || || |||||| | ||||||| |||||| | ||| Sbjct 584354 ATATCATGTTTGGTTTTGCGCTTGAACTCTGCCTTGAAGTGTTCAAGGAGAGTGTTGTCG 584295 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || || || || || | || || || || ||||| || ||||| |||| | ||| || Sbjct 584294 AAGTCCTCGCCGCCAAGATGGGTGTCACCAGCGGTAGCCTTGACGGCAAAAACACCACCA 584235 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 || || | | || ||||| || || || || |||| ||| || || | || ||| Sbjct 584234 GTGATATTAAGGAGAGAGACATCGAAAGTCCCTCCCCCCAAGTCGAAGATCAAAACATTC 584175 Query 7580 GTATC-GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 | || || || | | || ||||||||| || || ||||| || || || || || || Sbjct 584174 TTCTCTGTTTTCGAT-TGCTGATCGAGACCATAGGCAATAGCAGCGGCAGTAGGCTCGTT 584116 Query 7639 AATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 |||||||| ||||| | ||||||||||| | | |||||||| || || | || | Sbjct 584115 GATAATACGCAAGACC-TCGAGGCCAGCAATGGCACCAGCATCTTTAGTAGCCAGGCGCT 584057 Query 7698 GCGAATCGTTAAAGTAGGCCGGGAC 7722 | || || || ||||| || || || Sbjct 584056 GGGAGTCATTGAAGTAAGCAGGAAC 584032 >seq1222 Length=59073 Score = 89.7 bits (98), Expect = 7e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACA 7653 ||||| |||||||| || ||||| || || || || ||||| || | ||||| || |||| Sbjct 3534 TTCTTGTCGAGACCATAGGCGATGGCAGCAGCGGTGGGTTCGTTGACAATACAGAGGACA 3475 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || ||||| || || || | ||||| || || || || || || | || |||||||| Sbjct 3474 GTA-AGGCCGGCGATGGTACCGGCATCCTTGGTGGCCTGGCGCTGAGCGTCATTAAAGTA 3416 Query 7714 GGCCGGGACCGTTACGACCGCGT 7736 ||| ||||| || |||| | ||| Sbjct 3415 GGCGGGGACGGTGACGATCTCGT 3393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635116405634600