Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1112 100 3e-16 >seq1112 Length=1085269 Score = 100 bits (110), Expect = 3e-16 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || |||||||| || | ||||||||| | | |||| ||| || || ||||| | Sbjct 231489 CAAGCAAAATCGGTGTGCATTCCCTCGTCACGAGAGATCAGTTCGTTGGAGAATGTCAGG 231430 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 |||||||||| ||| | || || | |||||| ||||||||||| || || || ||||| Sbjct 231429 CCAGGCATCAATCCGCGCTTCTTGAGCCAGAAAATAGAAGCAAAGGAACCGGAGAAGAAG 231370 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 ||||| || || || ||||| || || || | || || ||| | | | || Sbjct 231369 ATACCCTCGACCGCAGCAAATGCGACGAGACGCTCGGCA-AACGTTGAGCGACGGTCGGA 231311 Query 19141 -ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTAT 19193 ||||| || || ||||| ||||||||||| || | || || || ||||| || Sbjct 231310 GATCCACTTGAGCGCCCAGTCAGCCTTCTTCTTGATGCACGGAATAGTCTCGAT 231257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562094290566600