Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1112 134 3e-26 >seq1112 Length=1085269 Score = 134 bits (148), Expect = 3e-26 Identities = 172/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| ||||| || |||||| || ||||| || ||| || |||||||||| || Sbjct 231490 GCAAGCAAAATCGGTGTGCATTCCCTCGTCACGAGAGATCAGTTCGTTGGAGAATGTCAG 231431 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 |||||||| | || | || |||||||||||||| | || || || || |||||||| Sbjct 231430 GCCAGGCATCAATCCGCGCTTCTTGAGCCAGAAAATAGAAGCAAAGGAACCGGAGAAGAA 231371 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || || || ||| ||| | ||| | || | | | ||| || Sbjct 231370 GATACCCTCGACCGCAGCAAATGCGACGAGACGCTCGGCAAACGTTGAGCGACGGTCGGA 231311 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||||| ||||||||||| ||||||||||||||||| || || ||||| ||||| Sbjct 231310 GATCCACTTGAGCGCCCAGTCAGCCTTCTTCTTGATGCACGGAATAGTCTCGATGGC 231254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931508754809600