Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 2e-15 >seq2 Length=528078 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| |||||||| || || | || |||| || | ||||||||||| ||||| | | Sbjct 317980 AATGTTATAATCGGACAAGGTTCTCCCGTCCTCGAGCTGTTTACCAGCGAAAATGAGGCG 318039 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||| || || ||||| || |||||||| ||||| || ||||| || || Sbjct 318040 CTGTTGGTCGGGAGGAATTCCCTCCTTATCTTGAATTTTGGCCTTGACATTGTCGATGGT 318099 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || || || || || || || || || || || || || | ||||| | |||||||| Sbjct 318100 GTCAGAAGACTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGAGTTTTGACAAATATCTG 318159 Query 172067 CATT 172070 |||| Sbjct 318160 CATT 318163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905112636177000