Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1234 89.7 2e-12 >seq1234 Length=262610 Score = 89.7 bits (98), Expect = 2e-12 Identities = 172/251 (69%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 302569 ATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACA 302628 ||||||||||| ||||| |||||||| || || || ||||| | || || || Sbjct 57735 ATGTCTTCCATGGCCTTGACCAAACGACGTTGGATGTACCCAGTCTCGGCGGTCTTGACG 57794 Query 302629 GCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT 302688 || ||||| || | ||| | ||||| |||| || |||||||| | |||| || ||| Sbjct 57795 GCCGTATCGATCAAACCTTCTCGACCGGCCATGGCGTGGAAGAAAAATTCTTGTGG-CGT 57853 Query 302689 -AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTT 302747 ||||| | || | | ||| | || |||||||| | || ||| | ||| |||| ||| Sbjct 57854 CAGCCCACGAAGATACGAGTTTTCGACGAAACCTCTCGACTCCGCGCAATAGTCGTCCTT 57913 Query 302748 GGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTT 302807 | | || || || || || | | || | || | || ||||||||||| || || Sbjct 57914 GTTGAAATGGGGTAGCGTACGATGCTTGAACCCAAAAGGAATACGCTTTCCTTCGACCGA 57973 Query 302808 CTGCTGTCCCA 302818 ||| || |||| Sbjct 57974 CTGTTGACCCA 57984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471778658925905