Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1955 98.7 7e-16 seq2 95.1 8e-15 >seq1955 Length=526780 Score = 98.7 bits (108), Expect = 7e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || ||||| || || |||||||| ||||| |||||||||||||| || ||||| | Sbjct 128754 ACGCAAGACCAAGTGAAGGGTGCTCTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGCCC 128695 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || || | || || |||||||| ||||| |||||||| || | || | || || || Sbjct 128694 ATCTTCGAGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCGGGTGGGATTCCCTCCTT 128635 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || ||| ||| |||| || | ||||| || || || || | ||| || Sbjct 128634 ATCTTGAATCTTCGCCTTCACGTTATCAATCGTGTCCGAGGACTCGACTTCCAACGTAAT 128575 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || || | ||| || || || ||||||||| Sbjct 128574 AGTCTTGCCGGTAAGCGTCTTGACGAAAATCTGCATA 128538 >seq2 Length=528078 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||| || || || ||||||||| || || ||||| || Sbjct 317139 CCACCACGGAGACGGAGCACCAAGTGGAGGGTTGACTCTTTTTGGATATTATAATCCGAA 317198 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| || | || || || || || ||||| ||||| || || | || Sbjct 317199 AGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCAGGTGGG 317258 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| || || || ||| |||| | | |||| |||||| || || || Sbjct 317259 ATGCCTTCCTTATCCTGGATCTTCGCCTTCA-CGTTGTCAATGGTGTCAGAGGACTCGAC 317317 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||||| || || || | |||||| ||||||||||||||| Sbjct 317318 CTCGAGGGTGATCGTCTTCCCGGTGAGCGTTTTCACAAAGATCTGCATA 317366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328695727444800