Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1112 131 2e-24 >seq1112 Length=1085269 Score = 131 bits (144), Expect = 2e-24 Identities = 195/265 (74%), Gaps = 9/265 (3%) Strand=Plus/Plus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||||||||||||||| ||||| | || |||||||||||| ||||||| || | | Sbjct 231173 GAGAACATCCACTCTGAAACTTACTCATTGCTCATCGACACCTACATCAAGGAGCCCG-C 231231 Query 1456075 GAGAAGGACCACCTCT-TTCG-CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCG 1456132 | || | | | | |||| |||||||| || | |||| | | ||| ||||| | Sbjct 231232 G-CAACGTGAATTTTTGTTCGATGCCATCGAGACTATTCCGTGCATCAAGAAGAAGGCTG 231290 Query 1456133 ACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGG 1456192 |||||||| | ||||||||| | | | ||| || ||||||||||| ||||||| Sbjct 231291 ACTGGGCGCTCAAGTGGATCTCCGA-CCGTCGCTCAAC-GTTTGCCGAGCGTCTCGTCGC 231348 Query 1456193 CTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCA 1456250 ||||| || |||||||| ||||| ||||| || || ||| | || || ||||||| Sbjct 231349 ATTTGCTGCGGTCGAGGGTATCTTCTTCTCCGGTTCCTT-TGCTTCTATTTTCTGGCTCA 231407 Query 1456251 AGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||| | ||||| || || Sbjct 231408 AGAAGCGCGGATTGATGCCTGGCCT 231432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177612026954530