Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizoctonia_20solani_20[genbank_20GCA_5F001286725.1_202015-08-31] 2,065 sequences; 56,028,462 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1112 118 1e-21 >seq1112 Length=1085269 Score = 118 bits (130), Expect = 1e-21 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||||||||| ||||| ||||| || ||||| ||| || Sbjct 231486 GCAAAATCGGTGTGCATTCCCTCGTCACGAGAGATCAGTTCGTTGGAGAATGTCAGGCCA 231427 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | || |||||||| | ||||||||| | | ||| || || ||||||||||| Sbjct 231426 GGCATCAATCCGCGCTTCTTGAGCCAGAAAATAGAAGCAAAGGAACCGGAGAAGAAGATA 231367 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA-GGAGCGGGAC-TTTGTATCAA 130193 ||||| || || || || | ||||||||| ||||| | | | ||| | | | | Sbjct 231366 CCCTCGACCGCAGCAAATGCGACGAGACGCTCGGCAAACGTTGAGCGACGGTCGGA--GA 231309 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253 |||||| | |||||| | ||||| |||| ||| ||||| | |||| ||| || || | Sbjct 231308 TCCACTTGAGCGCCCAGTCAGCCTTCTTCTTGATGCACGGAATAGTCTCGATGGCATCGA 231249 Query 130254 A 130254 | Sbjct 231248 A 231248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618419236641400