Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2220 143 6e-29 >seq2220 Length=173857 Score = 143 bits (158), Expect = 6e-29 Identities = 141/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 230428 GACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAA 230487 || ||| |||| || |||| |||||||||||||| | || ||| | ||||||||||| Sbjct 62856 GATGCTCTTCCCTGCGGCCTCATTGGCATGAACGCCAAGCTCATGCGCCAGTACATCGAG 62797 Query 230488 TTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAAC 230547 || || || |||||| | | || | || ||| ||||||| ||||||||||||| || Sbjct 62796 TTTGTCGCAGACCGCTTACTAGTGTCGCTGGGTAACGAGAAGGTGTACAACTCTACCAAT 62737 Query 230548 CCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGT 230607 ||||| | || ||||| | || ||||| ||||| ||||| ||||||||||| |||||| Sbjct 62736 CCCTTCGACTTCATGGACATGATCTCGCTACAAGGCAAGACGAACTTCTTCGAGAAGCGT 62677 Query 230608 GT 230609 || Sbjct 62676 GT 62675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057733964963090