Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 152 6e-32
seq4642 82.4 9e-11
>seq2220
Length=173857
Score = 152 bits (168), Expect = 6e-32
Identities = 356/536 (66%), Gaps = 6/536 (1%)
Strand=Plus/Minus
Query 24156 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 24215
|||||||| | ||| || | |||||| || || | ||| || ||||| | |||||||||
Sbjct 65253 CCCTCGTCACGACTGATGAGTTCGTTTGAGAAAGCGAGGCCTGGCATCAATCCACGCTTT 65194
Query 24216 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 24275
|| ||||| ||||| || || || || || |||||||| || || || || || |||||
Sbjct 65193 TTGAGCCAGAATATAGATGCGAAAGAACCGGAAAAGAAGATGCCCTCAACAGCAGCAAAA 65134
Query 24276 GCAATAAGTCTTTCTCCATAACCGGC---GCTGTCATGTATCCACTTTTGAGCCCAATCG 24332
|||| |||| | | ||| ||||| |||||| | ||||| ||
Sbjct 65133 GCAACTAGTCGGGTAGCGAATGTGGCATGTTTGTCAGATATCCATCGTAACGCCCAGTCT 65074
Query 24333 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 24392
||||| || || || || | |||||| |||| || ||| | | |||||
Sbjct 65073 GCCTTGCGCTTAACGGCGGGTATGGACTCTATTGCATCGAAAAGAAACTGCCGCTCATTG 65014
Query 24393 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 24452
||| || | || || || | || ||| | || ||||| ||||| || ||
Sbjct 65013 ACATCCTTGATGAGGGTGTCGATAAGGAGTGAATAGGTCTCGGAATGGATGTTCTCGATC 64954
Query 24453 GCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGT 24512
||||| || ||||| || |||| ||| || | |||||| || || | |||| ||
Sbjct 64953 ATGATTTGGAACCCGTAAAAGCATCGAGCTTCTGCAATCTGAACCTCGTTCGAAAACCGC 64894
Query 24513 TCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 24572
|| | | ||| ||||| ||||| ||||| || || || || || || ||||||
Sbjct 64893 TCAACCAGATTCTCATTGACTATGCCGTCGGATGCAGCGAAGAAAGCTAAAACATGTGAG 64834
Query 24573 ATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGATATCTTTAGATATA 24629
|| |||| ||| | || |||| | ||||||| || | || || | || | |
Sbjct 64833 ATGAAATGACGTTCATTTGAAGTTAGGCGGGTATTCCAGTCGATAATGTCAGTGGAGAGA 64774
Query 24630 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 24685
|||| |||||| | |||||||| || ||||| || ||||| ||||| ||||| ||
Sbjct 64773 TCCATTTCTTCGGCGGTCCAAAAAGAAGCCTCGGCTTTTTTGTACATGTTCCAAAT 64718
>seq4642
Length=14046
Score = 82.4 bits (90), Expect = 9e-11
Identities = 101/138 (73%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
||| || |||||||||| || || || |||||||| || | |||||| | || ||
Sbjct 10313 AGTGCCAGCATTAAATAGAGTTGGCGACGCGTGCGTGAAGTAACGTTCAGACATAAGGTT 10372
Query 54484 GTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 54543
||||||||| || | ||| |||||| | || || || |||||||||||||| |
Sbjct 10373 GTACGTCTCAATGACGCTGTCGATATCCTGCTTGTGGATGCCCACTGCGACACGCATGAT 10432
Query 54544 CATGTGCTGAGGTCTTTC 54561
|||||| ||||| | |||
Sbjct 10433 CATGTGTTGAGGACGTTC 10450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593672298842640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |