Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq4212 87.8 2e-12 >seq4212 Length=20478 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 |||||||||||| |||||||| ||||| | || || | |||| || ||||| ||||| Sbjct 2110 AGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCTTCGAGCTGCTTGCC 2051 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || | || || | ||||||||| || | ||| |||||||| |||||| || Sbjct 2050 GGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTCGCCTT 1991 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 ||| | | | | || ||| | |||| ||||| || || ||||| || || | || Sbjct 1990 CACGTTGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTCTTCCCCGTGAGGGT 1931 Query 21158 TTTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 1930 CTTGACGAAGATCTGCAT 1913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422225013235388