Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 87.8 2e-12
>seq4212
Length=20478
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
|||||||||||| |||||||| ||||| | || || | |||| || ||||| |||||
Sbjct 2110 AGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCTTCGAGCTGCTTGCC 2051
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
|| | || || | ||||||||| || | ||| |||||||| |||||| ||
Sbjct 2050 GGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTCGCCTT 1991
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
||| | | | | || ||| | |||| ||||| || || ||||| || || | ||
Sbjct 1990 CACGTTGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTCTTCCCCGTGAGGGT 1931
Query 21158 TTTGACAAATATTTGCAT 21175
||||| || || |||||
Sbjct 1930 CTTGACGAAGATCTGCAT 1913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422225013235388
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |