Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2220 91.5 3e-13 >seq2220 Length=173857 Score = 91.5 bits (100), Expect = 3e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 157274 TTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGGTTG 157333 ||||| || ||||| ||||| || || || || ||||||||||| | ||||| || ||| Sbjct 62681 TTCTCGAAGAAGTTCGTCTTGCCTTGTAGCGAGATCATGTCCATGAAGTCGAAGGGATTG 62740 Query 157334 GCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTAGTCCGCCACAAACTTG 157393 | ||||||||||||| |||| |||||| || || ||| || ||||||| | Sbjct 62741 GTAGAGTTGTACACCTTCTCGTTACCCAGCGACACTAGTAAGCGGTCTGCGACAAACTCG 62800 Query 157394 ATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCGACGGGAAGCGC 157446 ||||||| |||| ||| || | || || ||||| || |||||| || Sbjct 62801 ATGTACTGGCGCATGAGCTTGGCGTTCATGCCAATGAGGCCGCAGGGAAGAGC 62853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073675008050624