Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 111 1e-19
>seq4212
Length=20478
Score = 111 bits (122), Expect = 1e-19
Identities = 153/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||| || | ||| || |||||||||||||| || |||||||| ||| |||| | ||
Sbjct 2353 TAAGACAAGGTGGAGTGTGCTCTCCTTCTGGATATTGTAGTCTGACAGCGTGCGACCATC 2294
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| || || |||||||| || |||| ||||| || || || || | ||||||||||||
Sbjct 2293 CTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTC 2234
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
| ||| || ||| || | | | |||| ||||||||||| ||||| ||
Sbjct 2233 CTGAATCTTCGCCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCCAACGTAATGGT 2174
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||| || ||||| || || || ||||||
Sbjct 2173 TTTACCCGTGAGGGTCTTGACGAAAATCTGCATG 2140
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| |||||||||||||||||||||| || ||| |||| || || ||
Sbjct 2116 GTGTAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCTTCGAGCTG 2057
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| || | ||||| ||||||||||| | ||||||||||| || ||
Sbjct 2056 CTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTT 1997
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| |||||| |||| || |||||||| |||||
Sbjct 1996 CGCCTTCACGTTGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTCTTCCCCGT 1937
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| || ||||| |||||
Sbjct 1936 GAGGGTCTTGACGAAGATCTGCAT 1913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395043214094503
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |