Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2220 95.1 2e-14 >seq2220 Length=173857 Score = 95.1 bits (104), Expect = 2e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962 || || |||| | | || || || ||||| || || || |||||||| ||| | || Sbjct 63161 TTTGCTGAACGATTGGTAGCATTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTT 63102 Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 |||||||| |||||| ||||||| | ||| | ||||||||||||| | |||||| ||| Sbjct 63101 GCATCCATCTTCTGGCTCAAGAAACGCGGTCTCATGCCTGGTCTCACTTTCTCCAACGAG 63042 Query 102023 TTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 |||| | || || ||| | || ||||||||| ||| |||| || Sbjct 63041 CTCATCAGCCGTGATGAGGGTATGCACACCGACTTTGCTTGCTTGCTCTT 62992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989499773104065