Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq2220 95.1 1e-14 >seq2220 Length=173857 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 11651 CCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttt 11710 || ||||| | ||| || ||||| || || || | | || ||||||||||| || ||| Sbjct 65253 CCCTCGTCACGACTGATGAGTTCGTTTGAGAAAGCGAGGCCTGGCATCAATCCACGCTTT 65194 Query 11711 tttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAAT 11770 || | ||| ||||||| || || ||||| |||||||| || ||||| ||||| ||||| Sbjct 65193 TTGAGCCAGAATATAGATGCGAAAGAACCGGAAAAGAAGATGCCCTCAACAGCAGCAAAA 65134 Query 11771 GCTACTACTC 11780 || |||| || Sbjct 65133 GCAACTAGTC 65124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468485894871920