Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2220 161 1e-34 seq4642 87.8 2e-12 >seq2220 Length=173857 Score = 161 bits (178), Expect = 1e-34 Identities = 358/536 (67%), Gaps = 6/536 (1%) Strand=Plus/Minus Query 36179 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 36238 |||||||| | ||| || | |||||| || || | ||| || ||||| | ||||||||| Sbjct 65253 CCCTCGTCACGACTGATGAGTTCGTTTGAGAAAGCGAGGCCTGGCATCAATCCACGCTTT 65194 Query 36239 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 36298 || ||||| ||||| || || || || || |||||||| || || || || || ||||| Sbjct 65193 TTGAGCCAGAATATAGATGCGAAAGAACCGGAAAAGAAGATGCCCTCAACAGCAGCAAAA 65134 Query 36299 GCAATAAGTCTCTCTCCATAACCGGCA---CTGTCATGTATCCACTTTTGAGCCCAATCG 36355 |||| |||| | | |||| ||||| |||||| | ||||| || Sbjct 65133 GCAACTAGTCGGGTAGCGAATGTGGCATGTTTGTCAGATATCCATCGTAACGCCCAGTCT 65074 Query 36356 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 36415 ||||| || || || || | |||||| |||| || ||| | | ||||| Sbjct 65073 GCCTTGCGCTTAACGGCGGGTATGGACTCTATTGCATCGAAAAGAAACTGCCGCTCATTG 65014 Query 36416 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 36475 ||| || | || || || | || ||| | || ||||| ||||| || || Sbjct 65013 ACATCCTTGATGAGGGTGTCGATAAGGAGTGAATAGGTCTCGGAATGGATGTTCTCGATC 64954 Query 36476 GCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGT 36535 ||||| || ||||| || |||| ||| || | |||||| || || | |||| || Sbjct 64953 ATGATTTGGAACCCGTAAAAGCATCGAGCTTCTGCAATCTGAACCTCGTTCGAAAACCGC 64894 Query 36536 TCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 36595 || | | ||| ||||| ||||| ||||| || || || || || || |||||| Sbjct 64893 TCAACCAGATTCTCATTGACTATGCCGTCGGATGCAGCGAAGAAAGCTAAAACATGTGAG 64834 Query 36596 ATAAAATATTTTTCGTTTGGTGTTA---GTTTATTCCAATCATTGATATCTTTAGATATA 36652 || |||| ||| |||| |||| | ||||||| || | || || | || | | Sbjct 64833 ATGAAATGACGTTCATTTGAAGTTAGGCGGGTATTCCAGTCGATAATGTCAGTGGAGAGA 64774 Query 36653 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGAT 36708 |||| |||||| | |||||||| || ||||| || ||||| ||||| ||||| || Sbjct 64773 TCCATTTCTTCGGCGGTCCAAAAAGAAGCCTCGGCTTTTTTGTACATGTTCCAAAT 64718 >seq4642 Length=14046 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514 ||| || |||||||||| || || || |||||||| || | |||||| | || || Sbjct 10313 AGTGCCAGCATTAAATAGAGTTGGCGACGCGTGCGTGAAGTAACGTTCAGACATAAGGTT 10372 Query 66515 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 66574 |||||||||||| | ||| |||||| | || || || |||||||||||||| | Sbjct 10373 GTACGTCTCAATGACGCTGTCGATATCCTGCTTGTGGATGCCCACTGCGACACGCATGAT 10432 Query 66575 CATGTGCTGAGGTCTTTC 66592 |||||| ||||| | ||| Sbjct 10433 CATGTGTTGAGGACGTTC 10450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658118146976120