Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 95.1 9e-15
>seq2220
Length=173857
Score = 95.1 bits (104), Expect = 9e-15
Identities = 158/227 (70%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 22682 AAGC-CAAGGCACAGTGGGCTGCACAATGGCTGAATGCCACACATAAGTCTATCGCAACA 22740
|||| ||||||| | ||||| || |||| | || || |||| | |||| ||
Sbjct 65063 AAGCGCAAGGCAGACTGGGCGTTACGATGGATATCTGACAAACATGCCACATTCGCTACC 65122
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
|| || | || ||||| |||||||| ||| || | ||||| || || || || | |||
Sbjct 65123 CGACTAGTTGCTTTTGCTGCTGTTGAGGGCATCTTCTTTTCCGGTTCTTTCGCATCTATA 65182
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||| || || ||| | |||||||| | || || || ||||| | || ||
Sbjct 65183 TTCTGGCTCAAAAAGCGTGGATTGATGCCAGGCCTCGCTTTCTCAAACGAACTCATCAGT 65242
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907
|||||||| || | ||| |||||||||||| | | ||||| ||
Sbjct 65243 CGTGACGAGGGGATGCACACAGACTTTGCTTGTCTTTTATTTAGCCA 65289
Score = 91.5 bits (100), Expect = 1e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|| || || || || || || || | || ||||| || ||||| |||| ||||||||
Sbjct 63143 GCATTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTTGCATCCATCTTCTGGCTC 63084
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
|||||||| |||||||| || | | || ||||||||| | || |||||||| ||
Sbjct 63083 AAGAAACGCGGTCTCATGCCTGGTCTCACTTTCTCCAACGAGCTCATCAGCCGTGATGAG 63024
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCA 22907
||| | ||| ||||||||||| |||| || || ||
Sbjct 63023 GGTATGCACACCGACTTTGCTTGCTTGCTCTTCAGCCA 62986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356204758771129
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |