Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 174 2e-38
seq4642 89.7 7e-13
>seq2220
Length=173857
Score = 174 bits (192), Expect = 2e-38
Identities = 365/543 (67%), Gaps = 6/543 (1%)
Strand=Plus/Minus
Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033
||||| |||||||| | ||| || |||||||| || || | ||| || ||||| | ||
Sbjct 65260 GTGCATCCCCTCGTCACGACTGATGAGTTCGTTTGAGAAAGCGAGGCCTGGCATCAATCC 65201
Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093
||||||||| ||||| ||||| || || || || || ||||||||||| || || || ||
Sbjct 65200 ACGCTTTTTGAGCCAGAATATAGATGCGAAAGAACCGGAAAAGAAGATGCCCTCAACAGC 65141
Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAACTGGC---GCTGTCATGTATCCACTTTTGAGC 50150
||||| ||||| |||| | | |||| ||||| |||||| | ||
Sbjct 65140 AGCAAAAGCAACTAGTCGGGTAGCGAATGTGGCATGTTTGTCAGATATCCATCGTAACGC 65081
Query 50151 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 50210
||| || ||||| || || || || | ||||| |||| || ||| | |
Sbjct 65080 CCAGTCTGCCTTGCGCTTAACGGCGGGTATGGACTCTATTGCATCGAAAAGAAACTGCCG 65021
Query 50211 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 50270
||||| ||| || | || ||||| | || ||| | || ||||| |||||
Sbjct 65020 CTCATTGACATCCTTGATGAGGGTGTCGATAAGGAGTGAATAGGTCTCGGAATGGATGTT 64961
Query 50271 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACA 50330
|| || || || || ||||| || |||| ||| || | |||||| || || | |
Sbjct 64960 CTCGATCATGATTTGGAACCCGTAAAAGCATCGAGCTTCTGCAATCTGAACCTCGTTCGA 64901
Query 50331 AAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 50390
||| || ||| | | ||| ||||| ||||| ||||| || || || || || || ||
Sbjct 64900 AAACCGCTCAACCAGATTCTCATTGACTATGCCGTCGGATGCAGCGAAGAAAGCTAAAAC 64841
Query 50391 ATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAATCATTGATATCTTT 50447
|||| || ||||| ||| || | |||| | ||||||| || | || || |
Sbjct 64840 ATGTGAGATGAAATGACGTTCATTTGAAGTTAGGCGGGTATTCCAGTCGATAATGTCAGT 64781
Query 50448 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 50507
|| | ||| | |||||| | |||||||| || ||||| || ||||| ||||| |||||
Sbjct 64780 GGAGAGATCCATTTCTTCGGCGGTCCAAAAAGAAGCCTCGGCTTTTTTGTACATGTTCCA 64721
Query 50508 GAT 50510
||
Sbjct 64720 AAT 64718
>seq4642
Length=14046
Score = 89.7 bits (98), Expect = 7e-13
Identities = 150/214 (70%), Gaps = 10/214 (5%)
Strand=Plus/Plus
Query 80263 GTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA---GCTAGAC 80319
|| |||||||| ||||||||| ||||| |||| || | || || |||
Sbjct 10242 GTGTCATAGATACCCTCTATGGAGTCATCTTTCATACAAACCAAGAAGCATGAGCTT--- 10298
Query 80320 ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 80379
| ||| || || ||| || |||||||||| || || || |||||||| || | |
Sbjct 10299 AGTTGCGGATGAGGAGTGCCAGCATTAAATAGAGTTGGCGACGCGTGCGTGAAGTAACGT 10358
Query 80380 TCAGACAGTAGATTGTACGTCTCAAT--AGCTGATTCTATATCCCATTGATGAATTCCTA 80437
||||||| || |||||||||||||| |||| || |||||| | || || || |
Sbjct 10359 TCAGACATAAGGTTGTACGTCTCAATGACGCTG--TCGATATCCTGCTTGTGGATGCCCA 10416
Query 80438 CCGCGACACGCATTAACATGTGCTGAGGTCTTTC 80471
| ||||||||||| | |||||| ||||| | |||
Sbjct 10417 CTGCGACACGCATGATCATGTGTTGAGGACGTTC 10450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718209156754520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |