Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq2220 114 1e-20 >seq2220 Length=173857 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 13850 TTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAAT 13909 ||| ||||| |||| | | ||| ||||| || || | ||||| || | ||| || Sbjct 65296 TTTGAGATGGCTAAATAAAAGACAAGCAAAGTCTGTGTGCATCCCCTCGTCACGACTGAT 65237 Query 13910 AAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGC 13969 ||||||||||| || | | |||||||||||||| || ||||| | ||| ||||| | Sbjct 65236 GAGTTCGTTTGAGAAAGCGAGGCCTGGCATCAATCCACGCTTTTTGAGCCAGAATATAGA 65177 Query 13970 AGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCC 14029 || || || ||||||||||| || |||||||| |||||||| || | || ||| | Sbjct 65176 TGCGAAAGAACCGGAAAAGAAGATGCCCTCAACAGCAGCAAAAGCAACTAGTCGGGTAGC 65117 Query 14030 AAACGATGCTTTTTTGTTCGATATCCAT 14057 || | || | ||||| ||||||||| Sbjct 65116 GAATGTGGCATGTTTGTCAGATATCCAT 65089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479688164586200