Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 123 2e-23
>seq2220
Length=173857
Score = 123 bits (136), Expect = 2e-23
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 13638 TTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAAT 13697
||| ||||| |||| | | ||| ||||| || || | ||||| || | ||| ||
Sbjct 65296 TTTGAGATGGCTAAATAAAAGACAAGCAAAGTCTGTGTGCATCCCCTCGTCACGACTGAT 65237
Query 13698 AAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGC 13757
||||||||||| || | | |||||||||||||| || ||||| | ||| ||||| |
Sbjct 65236 GAGTTCGTTTGAGAAAGCGAGGCCTGGCATCAATCCACGCTTTTTGAGCCAGAATATAGA 65177
Query 13758 AGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCC 13817
||||| || ||||||||||| || |||||||| |||||||| || | |||||| |
Sbjct 65176 TGCGAAAGAACCGGAAAAGAAGATGCCCTCAACAGCAGCAAAAGCAACTAGTCGGGTAGC 65117
Query 13818 AAACGATGCTTTTTTGTTTGATATCCAT 13845
|| | || | ||||| |||||||||
Sbjct 65116 GAATGTGGCATGTTTGTCAGATATCCAT 65089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478549059182520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |