Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq4212 118 9e-22 >seq4212 Length=20478 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || |||||||||||||| || || ||||| || | || || | ||||| |||||| Sbjct 2343 TGGAGTGTGCTCTCCTTCTGGATATTGTAGTCTGACAGCGTGCGACCATCCTCAAGCTGC 2284 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| | | || | ||||||||||||| ||| | || ||||||||| ||| ||| Sbjct 2283 TTTCCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGAATCTTC 2224 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | ||||| || | |||||| ||| | || ||||||||||| ||| Sbjct 2223 GCCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCCAACGTAATGGTTTTACCCGTG 2164 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || || || ||||||||||| Sbjct 2163 AGGGTCTTGACGAAAATCTGCAT 2141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421217094844643