Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 118 9e-22
>seq4212
Length=20478
Score = 118 bits (130), Expect = 9e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| |||||||||||||| || || ||||| || | || || | ||||| ||||||
Sbjct 2343 TGGAGTGTGCTCTCCTTCTGGATATTGTAGTCTGACAGCGTGCGACCATCCTCAAGCTGC 2284
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| | | || | ||||||||||||| ||| | || ||||||||| ||| |||
Sbjct 2283 TTTCCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGAATCTTC 2224
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||||| | | ||||| || | |||||| ||| | || ||||||||||| |||
Sbjct 2223 GCCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCCAACGTAATGGTTTTACCCGTG 2164
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
|| || || || |||||||||||
Sbjct 2163 AGGGTCTTGACGAAAATCTGCAT 2141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421217094844643
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |