Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq5392 91.5 8e-14 seq1546 91.5 8e-14 >seq5392 Length=121005 Score = 91.5 bits (100), Expect = 8e-14 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||| ||| || ||||| | | |||||||||| |||||||||||||||||||| Sbjct 108690 AATAACAAAAAAAGATGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCAC 108749 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||| | |||| Sbjct 108750 GACGCTCTAACCAACTGAGCTAGTCGGCC 108778 >seq1546 Length=70127 Score = 91.5 bits (100), Expect = 8e-14 Identities = 75/91 (82%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| ||| ||||| | | || ||||||| |||||||||||||||||||| Sbjct 19983 AAGAAAAAA--AAACTGGCCAACGTGGGGGTCGAACCCAAGACCTTCGCGTTATTAGCAC 20040 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||| ||||||||||||| | |||||| Sbjct 20041 GACGCTCTAACCAACTGAGCTAGTCGGCCGT 20071 Score = 89.7 bits (98), Expect = 3e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 15151 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 15092 Query 11528 CCG 11530 ||| Sbjct 15091 CCG 15089 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261470029263868