Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 104 2e-17
>seq2220
Length=173857
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534
||| ||||| || |||| || || || | ||| || | ||| || || || | |
Sbjct 65275 ACAAGCAAAGTCTGTGTGCATCCCCTCGTCACGACTGATGAGTTCGTTTGAGAAAGCGAG 65216
Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594
|| ||||| ||||| | |||||| | ||| ||||| || || || | || ||||||||
Sbjct 65215 GCCTGGCATCAATCCACGCTTTTTGAGCCAGAATATAGATGCGAAAGAACCGGAAAAGAA 65156
Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAA 21654
||||||||||| |||||||| ||||||| ||| | || |||| | | ||| || |
Sbjct 65155 GATGCCCTCAACAGCAGCAAAAGCAACTAGTCGGGTAGCGAATGTGGCATGTTTGTCAGA 65096
Query 21655 TATCCATTTTTCTGCCCATTTTGCCTT 21681
||||||| | ||||| | ||||||
Sbjct 65095 TATCCATCGTAACGCCCAGTCTGCCTT 65069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531856632287320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |