Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq2220 104 2e-17 >seq2220 Length=173857 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| ||||| || |||| || || || | ||| || | ||| || || || | | Sbjct 65275 ACAAGCAAAGTCTGTGTGCATCCCCTCGTCACGACTGATGAGTTCGTTTGAGAAAGCGAG 65216 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594 || ||||| ||||| | |||||| | ||| ||||| || || || | || |||||||| Sbjct 65215 GCCTGGCATCAATCCACGCTTTTTGAGCCAGAATATAGATGCGAAAGAACCGGAAAAGAA 65156 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAA 21654 ||||||||||| |||||||| ||||||| ||| | || |||| | | ||| || | Sbjct 65155 GATGCCCTCAACAGCAGCAAAAGCAACTAGTCGGGTAGCGAATGTGGCATGTTTGTCAGA 65096 Query 21655 TATCCATTTTTCTGCCCATTTTGCCTT 21681 ||||||| | ||||| | |||||| Sbjct 65095 TATCCATCGTAACGCCCAGTCTGCCTT 65069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531856632287320