Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq4642 118 3e-21
seq4145 84.2 6e-11
seq2220 84.2 6e-11
>seq4642
Length=14046
Score = 118 bits (130), Expect = 3e-21
Identities = 215/312 (69%), Gaps = 2/312 (1%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449
||||| | ||||| | ||| || ||||| |||| | |||||||| | ||| ||
Sbjct 10507 TTCGGGTTCAAGACCCTTGAGCGGTCGTACCT-TCTCAGGATCAATGGGCGTGTTGCCGA 10449
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
||| || || || ||| | |||||||| || | || ||||| | |||| | ||
Sbjct 10448 ACGTCCTCAACACATGATCATGCGTGTCGCAGTGGGCATCCACAAGCAGGATATCGACAG 10389
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAAT 363569
|| ||||| || || || ||| | || ||| ||||||||||| ||||||| |
Sbjct 10388 CGTCATTGAGACGTACAACCTTATGTCTGAACGTTACTTCACGCACGCGTCGCCAACTCT 10329
Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629
| |||||||| |||| | |||| || | || ||||| | | ||||| ||
Sbjct 10328 ATTTAATGCTGGCACTCCTCATCCGCAACTAAGCTCATGCTTCTTGGTTTGTATGAAAGA 10269
Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689
|| ||||| |||||||||| ||||||||| |||| |||||| | || ||||| ||
Sbjct 10268 TGACTCCATAGAGGGTATCTATGACACACTCAAGAGTTGTGCCATGATCAGCAAGACCGC 10209
Query 363690 AGGCGGAATTGG 363701
||| ||||||||
Sbjct 10208 AGGTGGAATTGG 10197
>seq4145
Length=52608
Score = 84.2 bits (92), Expect = 6e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 65836 TCGGCATACTTAAACTGCACGACCATTCCTTGTGCGTTACGAATCGTTCCGTCATAATTG 65895
||| | ||| |||||| || | ||| ||| ||| || | ||| |||||||| |
Sbjct 44376 TCGCCGTACACAAACTGAACAAGATCTCCAAGTGAGTTGCGCACCGTGCCGTCATAGTGA 44317
Query 65896 CACATATTATCTTCACTTGCCTTTACAAGACAACGCTGGATGTAACCACTGTTTGCAGTT 65955
||| || || |||||| ||||||| |||||||||||| || | | ||| ||
Sbjct 44316 ACCATGACGTCCTCCAGTGCCTTGACAAGACGACGCTGGATGTACCCGGTTTCTGCTGTC 44257
Query 65956 TTTACCGCGGTATCAACGAGACCTTCACGCCCGGACATTGCAGAAAAGAAAAACTC 66011
|| || || ||||||| ||||||||| | || | ||| ||| |||||||||||
Sbjct 44256 TTGACGGCAGTATCAATGAGACCTTCTCTTCCAGCCATAGCATGGAAGAAAAACTC 44201
>seq2220
Length=173857
Score = 84.2 bits (92), Expect = 6e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 22750 CCAGTAAGTCTCATTGGTATCAATGCCGAATCA-ATGAGTACATATATTAAATTTGTTGC 22808
|| || |||||| ||||||| ||||| || || ||| || ||||||| ||||||| ||
Sbjct 65431 CCGGTCAGTCTCGTTGGTATGAATGC-GACTCTGATGCGTCAATATATTGAATTTGTCGC 65489
Query 22809 AGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGA 22868
|| ||||| |||| || || || | | ||| || || | |||||||||||
Sbjct 65490 CGACCGTCTTCTAATATCGCTGGGCAACGACAAGTTCTACAATTCCACCAATCCATTTGA 65549
Query 22869 ATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGA 22928
| ||||| | ||||| | |||||||||| |||||||| || || | ||| |||
Sbjct 65550 TTTTATGGACATGATTTCTATGCAAGGAAAGACAAATTTCTTTGAGAAGCGCGTTTCTGA 65609
Query 22929 ATA 22931
|||
Sbjct 65610 ATA 65612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303242667094826
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |