Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 100 3e-16
seq6241 86.0 6e-12
>seq4212
Length=20478
Score = 100 bits (110), Expect = 3e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| || || ||||| || || ||||| ||||| |||||||| || || |
Sbjct 2332 CTCCTTCTGGATATTGTAGTCTGACAGCGTGCGACCATCCTCAAGCTGCTTTCCGGCAAA 2273
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
||| | ||||||||| ||||| ||||| || || ||||| || ||| ||||| |
Sbjct 2272 GATCAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATT 2213
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | || || | ||||| | || | |||| ||||||||| || || || || ||
Sbjct 2212 GTCGATGGTGTCTGATGACTCCACCTCCAACGTAATGGTTTTACCCGTGAGGGTCTTGAC 2153
Query 131223 GAAAATCTGCATG 131235
|||||||||||||
Sbjct 2152 GAAAATCTGCATG 2140
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||| || || | |||| || |||||||| ||||||||||| |||
Sbjct 2140 GCCGCCACGAAGACGAAGGACGAGGTGTAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 2081
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||| || ||||||||||| ||| |||| | ||||||||||| |||||
Sbjct 2080 AAGAGTACGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGG 2021
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| ||| ||| ||| | | || | || || | ||||| |
Sbjct 2020 AATGCCCTCCTTGTCTTGGATCTTCGCCTTCACGTTGTCTATGGTGTCAGACGACTCCAC 1961
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || || || || || || ||||| ||||||||
Sbjct 1960 TTCCAATGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 1913
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || || | ||| || || | || | ||| ||||| || || ||||| |||||| |
Sbjct 1911 CCGCCACGAAGACGAAGAACGAGGTGAAGGGTAGACTCTTTCTGGATGTTATAATCGGAC 1852
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| ||||||||||| ||| |||| | ||||| ||||| |||||
Sbjct 1851 AGCGTACGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCAGGAGGA 1792
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| ||| ||| | | || | || || | ||||| |
Sbjct 1791 ATACCCTCCTTGTCCTGGATCTTCGCCTTTACATTGTCGATGGTGTCAGACGACTCCACC 1732
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
|| | || | |||||| || || || || || || || ||||||||| ||
Sbjct 1731 TCCAGCGTGATGGTTTTGCCCGTGAGGGTCTTGACAAAGATCTGCATGCCT 1681
Score = 82.4 bits (90), Expect = 7e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| || || | ||||| || || || | ||| ||||||||||| ||||||||||||
Sbjct 1684 GCCTCCACGGAGACGCAAGACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAATCGGA 1625
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||||| || |||||||| ||| |||| | |||||||||||| || ||
Sbjct 1624 GAGTGTCCGACCATCCTCAAGTTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGG 1565
Query 131127 GAT 131129
||
Sbjct 1564 AAT 1562
>seq6241
Length=43505
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || || || | || || |||||||| |||||||| |||||
Sbjct 25935 CCACCACGGAGGCGGAGGACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTA 25876
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| |||||||| |||||| |||| | |||||||||||| || |||
Sbjct 25875 AGAGTACGGCCATCCTCGAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGG 25816
Query 131128 AT 131129
||
Sbjct 25815 AT 25814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471973605237120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |