Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 138 2e-27
>seq2220
Length=173857
Score = 138 bits (152), Expect = 2e-27
Identities = 146/191 (76%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 243536 TCATTTGC-GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAG 243594
|| ||||| || ||| |||| ||| | || |||||||||||| | | |||||| | |||
Sbjct 62865 TCTTTTGCAGATGCTCTTCCCTGCGGCCTCATTGGCATGAACGCCAAGCTCATGCGCCAG 62806
Query 243595 TACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAAC 243654
|||||||| || || || |||||| | | | |||| ||| | ||||| |||||||||
Sbjct 62805 TACATCGAGTTTGTCGCAGACCGCTTACTAGTGTCGCTGGGTAACGAGAAGGTGTACAAC 62746
Query 243655 TCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTC 243714
|| | || ||||| | ||| ||||| | || ||||| ||||| || || |||||||||
Sbjct 62745 TCTACCAATCCCTTCGACTTCATGGACATGATCTCGCTACAAGGCAAGACGAACTTCTTC 62686
Query 243715 GAAAAGCGTGT 243725
|| ||||||||
Sbjct 62685 GAGAAGCGTGT 62675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102786130092050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |