Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2220 138 2e-27 >seq2220 Length=173857 Score = 138 bits (152), Expect = 2e-27 Identities = 146/191 (76%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 243536 TCATTTGC-GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAG 243594 || ||||| || ||| |||| ||| | || |||||||||||| | | |||||| | ||| Sbjct 62865 TCTTTTGCAGATGCTCTTCCCTGCGGCCTCATTGGCATGAACGCCAAGCTCATGCGCCAG 62806 Query 243595 TACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAAC 243654 |||||||| || || || |||||| | | | |||| ||| | ||||| ||||||||| Sbjct 62805 TACATCGAGTTTGTCGCAGACCGCTTACTAGTGTCGCTGGGTAACGAGAAGGTGTACAAC 62746 Query 243655 TCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTC 243714 || | || ||||| | ||| ||||| | || ||||| ||||| || || ||||||||| Sbjct 62745 TCTACCAATCCCTTCGACTTCATGGACATGATCTCGCTACAAGGCAAGACGAACTTCTTC 62686 Query 243715 GAAAAGCGTGT 243725 || |||||||| Sbjct 62685 GAGAAGCGTGT 62675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102786130092050