Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq4642 125 9e-24
seq2220 114 2e-20
>seq4642
Length=14046
Score = 125 bits (138), Expect = 9e-24
Identities = 299/445 (67%), Gaps = 23/445 (5%)
Strand=Plus/Plus
Query 114143 CCCTCAAATGTCTCGTATGGGCCC------TCAACCTCCGCCAATTCGGAGCTCGCCTCG 114196
|||| ||| ||||||||||| ||| ||| | ||| | ||| ||| ||||||
Sbjct 9116 CCCTGAAA-GTCTCGTATGGTCCCGACTGTTCAGCTTCCTC-AAT-----GCTGGCCTCG 9168
Query 114197 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGA 114255
|| | || || || || ||||||||||| | ||| | |||| | ||||| | ||
Sbjct 9169 AGTCCGGCATGGTAGATGGTCTCAAAAATCTGGAGATTGAGCTGCC-TCGCCTCCGCTGA 9227
Query 114256 ATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 114315
|| || | || ||| | ||||| |||| || ||||| || ||||| || |||||
Sbjct 9228 GTCGAATGGCAGGCGGAGAATCATAAAAGCATCAGCAAGACCCTGTACACCAAGACCAAT 9287
Query 114316 TGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACGGGATAAAAATTCCTATCGA 114374
||||| |||| | | || || || |||| ||| | ||| ||| | || |||||
Sbjct 9288 GGGGCGGTGTCGCGTGTTGGATTTGTGAGC-CTCTGGGATGGGGTAATAGTTGACATCGA 9346
Query 114375 TAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAA 114434
| | | ||||| || |||||| |||||||| | || |||||||||| | |||||
Sbjct 9347 TGATGCGGTTTAGGTTGCGGGTGACGACCTTTGTAACATCGTGAAGCTTTTGGAAATCAT 9406
Query 114435 AACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAG 114494
| ||| | | || || | || ||||||| || || || || ||||| |
Sbjct 9407 ACTTGC------CGTTGGAGATGTAAGTGGGGAGGGCGAGGGAGGCAAGGTTGCACACCG 9460
Query 114495 AGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGG 114554
||| ||||| | | ||||| || ||||| || ||||| || || ||| ||||
Sbjct 9461 CGGTTTCATCTGGAGACGAGTACTGGATTATTTCAGTGCACAAGTTCGACGACTTGATGG 9520
Query 114555 TGCCCAAGTTCTTTTGATTTGACTT 114579
| |||||||||||||| || || ||
Sbjct 9521 TTCCCAAGTTCTTTTGGTTCGATTT 9545
>seq2220
Length=173857
Score = 114 bits (126), Expect = 2e-20
Identities = 346/525 (66%), Gaps = 17/525 (3%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| | |||||| |||||| |||||| || || ||||| || ||
Sbjct 63004 GCAAAGTCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTGAGACCA 63063
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||||||||| || ||||| | |||||| || | ||| || || |||||||||||
Sbjct 63064 GGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGATGCAAAGGAGCCAGAGAAGAAGATA 63123
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA--- 126223
||||| || ||||| || | | || ||||||||| | | || ||| |||
Sbjct 63124 CCCTCGACGGCAGCGAATGCTACCAATCGTTCAGCAAAG--GTGGAACGTTG-ATCAGTT 63180
Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283
| |||||||| ||||| | ||||| || | || || | ||||| || || ||
Sbjct 63181 ATCCACTTCAGTGCCCAGTCGGCCTTGCGCTTAACGCAGGGAATGGTCTCCATGGCATCG 63240
Query 126284 AAGAGTTCCTTC---TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340
|| || | ||| || |||| ||||| ||||| || | || ||||| ||| ||
Sbjct 63241 AAAAGGT-ATTCGCGTTGTCTG--GGATCCTTGATATAGGTGTCGATGAGGAGTGAGTAG 63297
Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399
|| || ||| | | | ||| || || || ||||||| | || ||||||
Sbjct 63298 GTCTCAGAGTGAATATTCTCCATCATAATTTGGAAAC-CGTAGAAGCACCGGGCTTCGGC 63356
Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459
||| ||||||| || ||| | | || || ||| || || |||||||| |
Sbjct 63357 GGCCTGAACCTCATTGGAGAAACGCTCAACGAGGTTTTCATTGACGATGCCATCGGATGC 63416
Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516
||| || || || || | || |||||| | | || || || || | || | |
Sbjct 63417 AGCGAAGAAGGCGAGTACATGTGATATGAAGTGGCGCTCGTTGTCATTGAGACGGTTGGT 63476
Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||||| | || || || |||||||| | |||||| ||||||||
Sbjct 63477 CCAGTCATGAACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCA 63521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597303997250440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |