Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4642 125 9e-24 seq2220 114 2e-20 >seq4642 Length=14046 Score = 125 bits (138), Expect = 9e-24 Identities = 299/445 (67%), Gaps = 23/445 (5%) Strand=Plus/Plus Query 114143 CCCTCAAATGTCTCGTATGGGCCC------TCAACCTCCGCCAATTCGGAGCTCGCCTCG 114196 |||| ||| ||||||||||| ||| ||| | ||| | ||| ||| |||||| Sbjct 9116 CCCTGAAA-GTCTCGTATGGTCCCGACTGTTCAGCTTCCTC-AAT-----GCTGGCCTCG 9168 Query 114197 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGCCTCGTCGGA 114255 || | || || || || ||||||||||| | ||| | |||| | ||||| | || Sbjct 9169 AGTCCGGCATGGTAGATGGTCTCAAAAATCTGGAGATTGAGCTGCC-TCGCCTCCGCTGA 9227 Query 114256 ATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 114315 || || | || ||| | ||||| |||| || ||||| || ||||| || ||||| Sbjct 9228 GTCGAATGGCAGGCGGAGAATCATAAAAGCATCAGCAAGACCCTGTACACCAAGACCAAT 9287 Query 114316 TGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACGGGATAAAAATTCCTATCGA 114374 ||||| |||| | | || || || |||| ||| | ||| ||| | || ||||| Sbjct 9288 GGGGCGGTGTCGCGTGTTGGATTTGTGAGC-CTCTGGGATGGGGTAATAGTTGACATCGA 9346 Query 114375 TAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAA 114434 | | | ||||| || |||||| |||||||| | || |||||||||| | ||||| Sbjct 9347 TGATGCGGTTTAGGTTGCGGGTGACGACCTTTGTAACATCGTGAAGCTTTTGGAAATCAT 9406 Query 114435 AACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAG 114494 | ||| | | || || | || ||||||| || || || || ||||| | Sbjct 9407 ACTTGC------CGTTGGAGATGTAAGTGGGGAGGGCGAGGGAGGCAAGGTTGCACACCG 9460 Query 114495 AGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGG 114554 ||| ||||| | | ||||| || ||||| || ||||| || || ||| |||| Sbjct 9461 CGGTTTCATCTGGAGACGAGTACTGGATTATTTCAGTGCACAAGTTCGACGACTTGATGG 9520 Query 114555 TGCCCAAGTTCTTTTGATTTGACTT 114579 | |||||||||||||| || || || Sbjct 9521 TTCCCAAGTTCTTTTGGTTCGATTT 9545 >seq2220 Length=173857 Score = 114 bits (126), Expect = 2e-20 Identities = 346/525 (66%), Gaps = 17/525 (3%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | |||||| |||||| |||||| || || ||||| || || Sbjct 63004 GCAAAGTCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTGAGACCA 63063 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||||||||| || ||||| | |||||| || | ||| || || ||||||||||| Sbjct 63064 GGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGATGCAAAGGAGCCAGAGAAGAAGATA 63123 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA--- 126223 ||||| || ||||| || | | || ||||||||| | | || ||| ||| Sbjct 63124 CCCTCGACGGCAGCGAATGCTACCAATCGTTCAGCAAAG--GTGGAACGTTG-ATCAGTT 63180 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | |||||||| ||||| | ||||| || | || || | ||||| || || || Sbjct 63181 ATCCACTTCAGTGCCCAGTCGGCCTTGCGCTTAACGCAGGGAATGGTCTCCATGGCATCG 63240 Query 126284 AAGAGTTCCTTC---TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340 || || | ||| || |||| ||||| ||||| || | || ||||| ||| || Sbjct 63241 AAAAGGT-ATTCGCGTTGTCTG--GGATCCTTGATATAGGTGTCGATGAGGAGTGAGTAG 63297 Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399 || || ||| | | | ||| || || || ||||||| | || |||||| Sbjct 63298 GTCTCAGAGTGAATATTCTCCATCATAATTTGGAAAC-CGTAGAAGCACCGGGCTTCGGC 63356 Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 ||| ||||||| || ||| | | || || ||| || || |||||||| | Sbjct 63357 GGCCTGAACCTCATTGGAGAAACGCTCAACGAGGTTTTCATTGACGATGCCATCGGATGC 63416 Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516 ||| || || || || | || |||||| | | || || || || | || | | Sbjct 63417 AGCGAAGAAGGCGAGTACATGTGATATGAAGTGGCGCTCGTTGTCATTGAGACGGTTGGT 63476 Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||| | || || || |||||||| | |||||| |||||||| Sbjct 63477 CCAGTCATGAACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCA 63521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597303997250440