Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 134 2e-26
seq4642 122 1e-22
>seq2220
Length=173857
Score = 134 bits (148), Expect = 2e-26
Identities = 351/526 (67%), Gaps = 17/526 (3%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| | |||||| |||||| |||||| || || ||||| |||||
Sbjct 63003 AGCAAAGTCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTGAGACC 63062
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||||||||| || ||||| | |||||| || | ||| |||||||||||||||||
Sbjct 63063 AGGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGATGCAAAGGAGCCAGAGAAGAAGAT 63122
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-- 127696
||||| || ||||| || | | || || |||||| | || || ||| ||||
Sbjct 63123 ACCCTCGACGGCAGCGAATGCTACCAATCGTTCAGCAAAG--GTGGAACGTTG-ATCAGT 63179
Query 127697 -AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTC 127755
| |||||||| ||||| | ||||| || | || || | ||||| || || ||
Sbjct 63180 TATCCACTTCAGTGCCCAGTCGGCCTTGCGCTTAACGCAGGGAATGGTCTCCATGGCATC 63239
Query 127756 AAAGAGTTCCTTC---TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 127812
|| || | ||| || |||| ||||| ||||| || | || ||||| ||| ||
Sbjct 63240 GAAAAGGT-ATTCGCGTTGTCTG--GGATCCTTGATATAGGTGTCGATGAGGAGTGAGTA 63296
Query 127813 TGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 127871
|| || ||| | | | ||| || || || ||||||| | || ||||||
Sbjct 63297 GGTCTCAGAGTGAATATTCTCCATCATAATTTGGAAAC-CGTAGAAGCACCGGGCTTCGG 63355
Query 127872 TTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 127931
||| ||||||| || ||| | | || || ||| || || ||||||||
Sbjct 63356 CGGCCTGAACCTCATTGGAGAAACGCTCAACGAGGTTTTCATTGACGATGCCATCGGATG 63415
Query 127932 CAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCT 127988
|||| || || || || | || |||||| | | || || || || | || |
Sbjct 63416 CAGCGAAGAAGGCGAGTACATGTGATATGAAGTGGCGCTCGTTGTCATTGAGACGGTTGG 63475
Query 127989 TCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||||||| | | || ||||||||||| | |||||| ||||||||
Sbjct 63476 TCCAGTCATGAACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCA 63521
>seq4642
Length=14046
Score = 122 bits (134), Expect = 1e-22
Identities = 267/395 (68%), Gaps = 10/395 (3%)
Strand=Plus/Plus
Query 116148 GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGG 116206
||| |||||||| | || || || || ||||||||||| | ||| | |||| | |
Sbjct 9159 GCTGGCCTCGAGTCCGGCATGGTAGATGGTCTCAAAAATCTGGAGATTGAGCTGCC-TCG 9217
Query 116207 CCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACAC 116266
|||| | || || || | || ||| | ||||| |||| || ||||| || ||||
Sbjct 9218 CCTCCGCTGAGTCGAATGGCAGGCGGAGAATCATAAAAGCATCAGCAAGACCCTGTACAC 9277
Query 116267 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACGGGATAAAAA 116325
| || ||||| ||||| |||| | | || || || |||| ||| | ||| ||| |
Sbjct 9278 CAAGACCAATGGGGCGGTGTCGCGTGTTGGATTTGTGAGC-CTCTGGGATGGGGTAATAG 9336
Query 116326 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 116385
|| |||||| | | ||||| || |||||| |||||||| | || |||||||||
Sbjct 9337 TTGACATCGATGATGCGGTTTAGGTTGCGGGTGACGACCTTTGTAACATCGTGAAGCTTT 9396
Query 116386 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 116445
| | ||||| | ||| | | || || | || ||||||| || || ||
Sbjct 9397 TGGAAATCATACTTGC------CGTTGGAGATGTAAGTGGGGAGGGCGAGGGAGGCAAGG 9450
Query 116446 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 116505
|| ||||| | ||| ||||| | | ||||| || ||||| || ||||| || ||
Sbjct 9451 TTGCACACCGCGGTTTCATCTGGAGACGAGTACTGGATTATTTCAGTGCACAAGTTCGAC 9510
Query 116506 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 116540
||| ||||| |||||||||||||| || || ||
Sbjct 9511 GACTTGATGGTTCCCAAGTTCTTTTGGTTCGATTT 9545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613456255895880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |