Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq6280 123 1e-22
seq5540 93.3 2e-13
>seq6280
Length=76176
Score = 123 bits (136), Expect = 1e-22
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379
|||| || || ||||| || || ||||||||||||||||||||||||||||| || ||||
Sbjct 43301 ATGCTGTCATCACTGTACCAGCCTATTTCAATGATGCACAACGGCAAGCAACGAAGGATG 43360
Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439
| || || ||||| ||| | | |||||||| | || || |||||||| || |||||||
Sbjct 43361 CCGGTCAAATTGCGGGTCTCGAAGTTCTTCGGGTGATCAACGAACCTACGGCTGCTGCTC 43420
Query 451440 TAGCATATGGACT 451452
| || ||||| ||
Sbjct 43421 TTGCCTATGGTCT 43433
>seq5540
Length=5447
Score = 93.3 bits (102), Expect = 2e-13
Identities = 195/287 (68%), Gaps = 14/287 (5%)
Strand=Plus/Minus
Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373
||| | |||| || || ||| | || || |||||||||||||||||| ||||||||| |
Sbjct 4782 TTAGTCATGCTGTCATCACTATACCAGCCTATTTCAATGATGCACAATGGCAAGCAATGA 4723
Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA---ACCTACAG 451430
| ||||| | || ||||| ||| | | || ||||| | || || || ||||| |
Sbjct 4722 AGGATGCCAGTCAAATTGCGGGTCTTGAAGTGCTTCGGGTGATGAACGATTCACCTATGG 4663
Query 451431 CAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAG 451490
| |||||||| || ||||| || ||| | | || | | ||| |
Sbjct 4662 CTGCTGCTCTTGCCTATGGTCT-GGACTGT--------TCTGATTCATCAGTGATTGCGG 4612
Query 451491 TATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG-ATGGGGTA 451549
| | ||| |||| || || || ||||| ||| | ||| | || || | || ||
Sbjct 4611 TCTATGACCTTGGAGGTGGTACCTTTGATATTTC-GATCTTGGAGATGCAGAAAGGTGTC 4553
Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596
|||||||| ||| |||||||||| |||||||| || || ||||| ||
Sbjct 4552 TTTGAAGTCAAGTCAACCAATGGCGATACTCACCTTGGTGGTGAGGA 4506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975550239815444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |