Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq748 172 7e-38 seq3555 147 3e-30 seq264 143 3e-29 seq3603 132 6e-26 seq4029 113 6e-20 seq4763 102 1e-16 seq790 93.3 5e-14 seq5382 91.5 2e-13 >seq748 Length=25156 Score = 172 bits (190), Expect = 7e-38 Identities = 246/344 (72%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 7491 CGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTAC 7550 |||| || ||||| || |||||||| | |||||| | || | |||||||| ||||| | Sbjct 1 CGGTAGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAGAGGGAAACATCGAACGTTC 60 Query 7551 CACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGT 7610 | ||||| || || ||||| || || || ||| ||| ||||| || ||||||| Sbjct 61 CTCCACCGAGATCGAAAATCAGGACATTGCGCTCGCCGTTAACCTTCTTGTCAAGACCGT 120 Query 7611 ACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAG 7670 | ||||| || || || || || ||||| || ||||| || ||||| ||| | || | Sbjct 121 ATGCGATGGCGGCAGCGGTAGGCTCATTGATGATACGGAGGATGTTCATGCCGGTGATGG 180 Query 7671 TTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGA 7730 | | || || || || ||||| ||||| || ||||| ||||| || || || || |||| Sbjct 181 TCCCTGCGTCCTTGGTAGCTTGCCGTTGGGAGTCGTTGAAGTACGCAGGAACGGTAACGA 240 Query 7731 CCGCGTCCGTGACTTTCTTA-CCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 | ||||| ||| | | || || |||||||| || || | || ||||| || ||| Sbjct 241 CGGCGTCGTTGA-TAGCGTAGCCCAGATACGACTCAGCAGTCTCCTTCATCTTCAAAAGG 299 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 ||||| || ||||||||||| | | ||||| || || || || Sbjct 300 ACCATGGAGGAAATCTCTTCGGGGGAAAACTCCTTGGTCTCGCC 343 >seq3555 Length=8835 Score = 147 bits (162), Expect = 3e-30 Identities = 195/269 (72%), Gaps = 5/269 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||| ||||||||||| || || || || ||||| || ||| | |||||||| Sbjct 7261 TCGAAATCTTCGCCACCCAAGTGAGTGTCACCTGCAGTCGCCTTCACTGCGAAGATACCA 7320 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | ||||| | |||||||||||| || || || ||||| || || || || | ||| Sbjct 7321 TCACTGATGTTAAGCAACGAAACATCGAAGGTTCCTCCACCGAGATCGAAGATCAAAACG 7380 Query 7577 TTCGTATCGTCGTCTTTGTTCT---TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | || || || | | | ||| | ||||||||| || || || || || || Sbjct 7381 TTCTTCTC--CGCTTTCGATTTGACGATCCAAACCGTACGCAATGGCAGCGGCAGTGGGC 7438 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || ||||||||||| || || |||||||| ||| | | ||||| | || || | Sbjct 7439 TCGTTAATAATACGGAGGACGTCAAGGCCAGCGATAATACCAGCATCCCTGGTTGCCAGA 7498 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 |||||||| ||||| |||||||| || || Sbjct 7499 CGTTGCGAGTCGTTGAAGTAGGCGGGTAC 7527 >seq264 Length=22205 Score = 143 bits (158), Expect = 3e-29 Identities = 265/386 (69%), Gaps = 6/386 (2%) Strand=Plus/Plus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || | | | || | || ||||| |||| |||| Sbjct 1948 GTGCGCTTGGCACGCTCGCAAGCACTCCTGAGCCGTCTGAGAGCACGAGGGTCCTCGGAG 2007 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 ||||| | ||| | || || ||||| | |||||| ||||| | ||| Sbjct 2008 ATATCGTGCTTCTTCTTCAACTTGAACTCATTCTTGAAGTGGTCCAGGAGGGTGTTGTCG 2067 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 |||||||| ||||||||||| ||||| || || ||||| || ||| | |||| ||| || Sbjct 2068 AAATCTTCGCCACCCAAGTGAGTATCACCTGCAGTCGCCTTCACTGCGAAGACACCACCA 2127 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | |||||||||||| || || || ||||| || || || || | |||||| Sbjct 2128 CTGATGTTAAGCAACGAAACATCGAAAGTTCCTCCACCGAGATCGAAGATCAAAACGTTC 2187 Query 7580 GTATCGTCGTCTTTGTTCT---TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || || |||| || || | ||||||||| || || || || || || || Sbjct 2188 TTCTC--CG-CTTTCGACTGGCGGTCCAAACCGTACGCAATGGCAGCGGCAGTGGGCTCG 2244 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 ||||| ||||| || || |||||||| || | | ||||| || || || | || Sbjct 2245 TTAATGATACGGAGGACGTCAAGGCCAGCGATGGCACCAGCATCCTTGGTTGCCAGACGC 2304 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGAC 7722 ||||| ||||| |||||||| || || Sbjct 2305 TGCGAGTCGTTGAAGTAGGCGGGTAC 2330 >seq3603 Length=531 Score = 132 bits (146), Expect = 6e-26 Identities = 196/275 (71%), Gaps = 2/275 (1%) Strand=Plus/Plus Query 7127 GGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTT 7186 ||||| || || || ||||| || | |||||||| | || || || |||||||| Sbjct 66 GGGATACGAGTGGAACCACCAACAAGGACGATTTCGTGGACGTTGCCCTTGTCGATCTTG 125 Query 7187 GAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGT 7246 || || || || ||| ||||| || || | | || ||||||||||| |||| Sbjct 126 GAATCCCGGAGAACTTTCTCGACGGGCTCGAGAGTGTTGCGGAACAAGTCACCGCACAAC 185 Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATA-GAAATCAACGCCGTCGTATAACGAATC 7305 ||||| ||||| |||||||| | ||| | | | |||||||| || ||||| | || || Sbjct 186 TCCTCGAAACGGGCACGGGTGA-GGACGGACATGAAATCAATACCCTCGTAAAGGGAGTC 244 Query 7306 AATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGT 7365 || |||||||| || || | | ||| || | || ||||| || ||||| || || || Sbjct 245 GATCTCAATGGTAGTCTGGGTAGCCGAGGAGAGGGTGCGCTTGGCACGCTCGCAAGCAGT 304 Query 7366 TCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 |||| |||||| || ||||| |||||| ||||| Sbjct 305 CCGTAGACGACGGAGCGCACGAGGGTTAGTGGAAA 339 >seq4029 Length=68196 Score = 113 bits (124), Expect = 6e-20 Identities = 338/519 (65%), Gaps = 2/519 (0%) Strand=Plus/Plus Query 6581 TTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTA 6640 || || || || || || | |||||| || || || |||||||| || | ||||| Sbjct 67671 TTGTATTTCTCAGCCTCGTTGACCATGCGCTCGATCTCCTCTTTCGACAAGCGACCCTTG 67730 Query 6641 TCATTCGTAATCGTAAT-CTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATT 6699 ||||| || ||||| || | |||| ||| || | | ||| || ||| || || Sbjct 67731 TCATTAGTGATCGTGATGCGATTCGACTTT-CCGGTAGTCTTGTCAGACGCAGACACGTT 67789 Query 6700 CAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGC 6759 ||| ||||| || ||||| | ||||| | || | ||| || || ||| | || || Sbjct 67790 CAAGATACCGTTGGCATCTATGTCGAAGGTGACCTCAATCTGAGGAACACCACGAGGAGC 67849 Query 6760 GGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACG 6819 | ||||| || | | || || | || || || |||| ||| ||| | | ||| Sbjct 67850 AGGAGGAATGCCAGAGAGGTCGAACTTGCCGAGCAAGTTGTTGTCCCTCGTGTACCCACG 67909 Query 6820 TTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGAT 6879 ||||| || || |||| ||| || | || || || ||||| || || ||| | Sbjct 67910 CTCACCCTCGTACACTTGAATCAAGACACCCGGCTGGTTGTCTTGGTATGTCGAAAAGGT 67969 Query 6880 TTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACC 6939 | |||||| | |||| || || || | | ||| | |||||||| | |||||| Sbjct 67970 CTCAGATTTCTTGGTCGGAACGGTGGTGTTGCGCTTAATGAGGGGGGTCATCACACCACC 68029 Query 6940 CATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGA 6999 ||| |||| || || |||||||| | ||||| | || | ||||| ||| Sbjct 68030 AGCAGTCTCGATACCGAGCGACAGAGGAGCGACGTCGAGAAGGAGGAGGTCCTGAGTCTT 68089 Query 7000 TTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 ||| ||||| | | ||| ||||||||||| | || ||||| || |||||||| Sbjct 68090 CTCGGAAGTGTCACCGGAAAGGATAGCGGCTTGGACGGCAGCACCGTAAGCAACCGCCTC 68149 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAA 7098 |||||||| || | || || | || || ||||| || Sbjct 68150 GTCGGGGTTGATGCTCTTGTTGGGCTCCTTGCCGTTGAA 68188 >seq4763 Length=6291 Score = 102 bits (112), Expect = 1e-16 Identities = 209/308 (68%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || || || || || || ||||||||||| ||||| ||| || ||||| | || Sbjct 2997 TTCTACCAAGCCTCGACCTCGGAGCTCTACGGAAAAGTCGTTGAGACCCCACAGAGCGAG 3056 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCG 22563 | || || || || || || || || || || || || || | ||| ||| Sbjct 3057 ACGACGCCTTTCTATCCTCGCAGCCCGTACGGCGTTGCCAAGCTGTACGCATACTGGATT 3116 Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 || ||||| || | || ||||||| |||| ||| || ||||| || | ||||||||| Sbjct 3117 ACGGTTAACTACCGCGAGGCATACGGAATGTATGCGTGTAATGGAATTCTTTTCAACCAC 3176 Query 22624 GAATCACCGAGACGGGGTGAAAACTTCGTGAC-ACGAAAAATAACACTCGGTGTCGCTAA 22682 || ||||| || || | |||||| || | ||||| || || | || || | Sbjct 3177 GAGAGCCCGAGGCGAGGGAGGACCTTCGTCACGAGGAAAATTAGCA-GGGCCGTTGCAGA 3235 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 |||||| | || || || | || || ||||| |||||| | |||||| || |||| || Sbjct 3236 TATCAGCGTCGGCAAGCAGCACTGCTTGTACCTCGGTAACATCGATGCGCAAAGAGACTG 3295 Query 22743 GGGTCATG 22750 ||| |||| Sbjct 3296 GGGACATG 3303 >seq790 Length=59236 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||| | ||| ||||| || || || || ||| ||||||| ||| Sbjct 25543 ATCGAAATCTTCACCACCAAGGTGGGTATCACCGGCAGTTGCCAGGACCTCAAAGACACC 25602 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || ||| | | |||||||| || || |||||||| || ||| | | || | Sbjct 25603 ATCGTCGATGGAAAGTAGGGAAACATCGAAGGTTCCACCACCGAGATCATAGACGATAAT 25662 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || || || | ||||| | |||||| || |||||||| || || || || || Sbjct 25663 TTGCGACTC-TC--CACCCTTCTTGTTGAGACCATAGGCGATAGCGGCAGCGGTAGGCTC 25719 Query 7636 ATTAATAATACGAAG 7650 ||||| |||||||| Sbjct 25720 GTTAATGATACGAAG 25734 >seq5382 Length=4005 Score = 91.5 bits (100), Expect = 2e-13 Identities = 209/310 (67%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || || ||||| | |||||||||||||| ||||| || || ||||| | || Sbjct 3395 TTCTACCAAGCATCGATCTCAGAGCTCTACGGAAAAGTCGTCGAGACCCCACAGAGCGAG 3454 Query 22504 AATACACCGTTTTACCCGCGTTCACCA--TATGGGGTAGCTAAATTGATGGGATATTGGG 22561 | || || || || || || || || || || || || || || | ||| ||| Sbjct 3455 ACCACGCCTTTCTATCCTCG--CAGCACGTACGGTGTCGCCAAGCTGTACGCATACTGGA 3512 Query 22562 CGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACC 22621 || ||||| || | || | ||||| | || ||| || ||||| || | ||||||| Sbjct 3513 TTACGGTTAACTACCGCGAGGCGTACGGGACGTATGCGTGTAATGGAATCCTTTTCAACC 3572 Query 22622 ACGAATCACCGAGACGGGGTGAAAACTTCGTGAC-ACGAAAAATAACACTCGGTGTCGCT 22680 |||| ||||| || || | |||||| || | ||||| || || | || || Sbjct 3573 ACGAGAGCCCGAGGCGAGGGAGGACCTTCGTCACGAGGAAAATTAGCA-GGGCCGTTGCA 3631 Query 22681 AATATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGAT 22740 ||||||| | || || || | || || ||||| |||||| | |||||| || |||| Sbjct 3632 GATATCAGCGTCGGCAAGCAGCACTGCTTGTACCTCGGTAACATCGATGCGCAAAGAGAC 3691 Query 22741 TGGGGTCATG 22750 ||||| |||| Sbjct 3692 TGGGGACATG 3701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635080060160120