Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2220 127 3e-24 >seq2220 Length=173857 Score = 127 bits (140), Expect = 3e-24 Identities = 351/526 (67%), Gaps = 19/526 (4%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873 ||||||||||| ||| | ||||||||||| || | | || |||| | ||| ||| Sbjct 63521 TGGACTGCTGAGGAGATGGATCTCTCAAAAGACGTTCATGACTGGACCAACCGTCTCAAT 63462 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || || || | |||||| | | | || || ||||| |||| |||||||| || Sbjct 63461 GACAACGAGCGCCACTTCATATCACATGTACTCGCCTTCTTCGCTGCATCCGATGGCATC 63402 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCT 101993 || ||| || || | | || | ||||||| || || | ||||| | | Sbjct 63401 GTCAATGAAAACCTCGTTGAGCGTTTCTCCAATGAGGTTCAGGCCGCCGAAGCCCGGTGC 63342 Query 101994 TTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCAT 102052 ||||| | || || | | || ||| | | | || ||||| ||| ||||| Sbjct 63341 TTCTACG-GTTTCCAAATTATGATGGAGAATATTCACTCTGAGACCTACTCACTCCTCAT 63283 Query 102053 AGACAAGTATATTAAGGATGGTGCTGAGAA---GAAGCAGCTCTTTGAAGCCATCCAAAC 102109 |||| ||||| |||||| | || || ||| | || || || ||||| | || Sbjct 63282 CGACACCTATATCAAGGATCC--CAGACAACGCGAAT-ACCTTTTCGATGCCATGGAGAC 63226 Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTC 102166 |||| || || | || || || ||||| |||||||| | |||| ||| || Sbjct 63225 CATTCCCTGCGTTAAGCGCAAGGCCGACTGGGCACTGAAGTGGATAACTGAT-CAACGTT 63167 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 | |||||||||| ||| | | ||||| || || |||||||||||||||||||| Sbjct 63166 CCA--CCTTTGCTGAACGATTGGTAGCATTCGCTGCCGTCGAGGGTATCTTCTTCTCTGG 63109 Query 102227 TTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 ||||| ||| | || | ||||||||||| || ||||||||||| |||||| |||| Sbjct 63108 CTCCTT-TGCATCCATCTTCTGGCTCAAGAAACGCGGTCTCATGCCTGGTCTCACTTTCT 63050 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||||| ||| ||||| ||||| | ||| || ||||| Sbjct 63049 CCAACGAGCTCATCAGCCGTGATGAGGGTATGCACACCGACTTTGC 63004 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 102242 ||||| | || ||||| ||||||||| |||||||| || ||||| ||| |||| Sbjct 65123 CGACTAGTTGCTTTTGCTGCTGTTGAGGGCATCTTCTTTTCCGGTTCTTTCGCATCTATA 65182 Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 102302 | |||||||| ||||| || | |||||||| ||| ||||| ||||| || ||| | Sbjct 65183 TTCTGGCTCAAAAAGCGTGGATTGATGCCAGGCCTCGCTTTCTCAAACGAACTCATCAGT 65242 Query 102303 CGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||||||| | ||| ||| ||||| Sbjct 65243 CGTGACGAGGGGATGCACACAGACTTTGC 65271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620690855102960