Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2220 107 2e-18 >seq2220 Length=173857 Score = 107 bits (118), Expect = 2e-18 Identities = 199/286 (70%), Gaps = 11/286 (4%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||||||| || ||| || ||||||||||| || | |||| Sbjct 63022 CCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATGAGACCGCGTTTC 63081 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| ||| ||||| |||||||| ||||| || ||||| Sbjct 63082 TTGAGCCAGAAGATGGATGCAAAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAT 63141 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGACTTG-TC---GAACCACTTGAGAGCCCAGTT 119689 || | | || ||||| |||||| || ||| || | |||||| || ||||||| Sbjct 63142 GCTACCAATCGTTCAGC-AAAGGTGGAACGTTGATCAGTTATCCACTTCAGTGCCCAGTC 63200 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTC---TTTTC 119746 |||||| |||| | |||||| | || | ||||| |||||||| | ||| || || Sbjct 63201 GGCCTTGCGCTTAACGCAGGGAATGGTCTCCATGGCATCGAAAAGGT-ATTCGCGTTGTC 63259 Query 119747 AGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCA 119792 | |||||| ||||| | || ||||| |||||||||||| Sbjct 63260 TG--GGATCCTTGATATAGGTGTCGATGAGGAGTGAGTAGGTCTCA 63303 Score = 82.4 bits (90), Expect = 9e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 119206 CATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCA 119265 |||| ||| || | ||| || |||||||| ||||| || | | || || | |||| Sbjct 65614 CATATTCAGAAACGCGCTTCTCAAAGAAATTTGTCTTTCCTTGCATAGAAATCATGTCCA 65555 Query 119266 TAAAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGA 119324 |||| ||||| ||||| |||| || ||| | || |||| ||| | || |||||| Sbjct 65554 TAAAATCAAATGGATTGGTGGAATTGTAGAACTTGTCGTTGCCCAGCGATATT-AGAAGA 65496 Query 119325 CGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTA 119384 || |||| |||| | || ||||||| |||| || ||||||||| | |||| | Sbjct 65495 CGGTCGGCGACAAATTCAATATATTGACGCATCAGAGTCGCATTCATACCAACGAGACTG 65436 Query 119385 CACGGGAGAGCATC 119398 |||||||||||| Sbjct 65435 ACCGGGAGAGCATC 65422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588927092905400