Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 161 2e-34
seq4824 122 2e-22
seq6241 96.9 8e-15
seq1236 93.3 9e-14
>seq4212
Length=20478
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || ||||| ||||| |||| |||||| | || ||||||
Sbjct 2121 ACGAGGTGTAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCTTCG 2062
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| ||||||||||| || ||||||||
Sbjct 2061 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGG 2002
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||| || |||||||| || |||||||| | || | ||||||
Sbjct 2001 ATCTTCGCCTTCACGTTGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTCTTC 1942
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 1941 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1913
>seq4824
Length=32535
Score = 122 bits (134), Expect = 2e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| |||||||| || ||||| || ||||| | || || | ||||||||
Sbjct 139 ACGAGGTGAAGGGTGGACTCCTTCTGAATGTTATAATCTGAGAGCGTACGACCATCTTCC 80
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
| |||||| |||||||||||||| || ||||| || ||||| |||||||| ||||| |||
Sbjct 79 AACTGCTTCCCTGCGAAGATAAGGCGCTGTTGATCAGGAGGGATGCCTTCCTTGTCCTGA 20
Query 195052 ATTTTTTGCTTGACGTT 195068
|| || ||| |||||
Sbjct 19 ATCTTCGCCTTCACGTT 3
>seq6241
Length=43505
Score = 96.9 bits (106), Expect = 8e-15
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||||||||| || ||||| || ||||| ||| |||||| | ||||| ||||||||
Sbjct 25912 GTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTAAGAGTACGGCCATCCTCGAGCTG 25853
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
||| ||||||||||| || || || ||||| || || ||||
Sbjct 25852 CTTTCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGGATGC 25812
>seq1236
Length=761
Score = 93.3 bits (102), Expect = 9e-14
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| | ||| ||||||||||| || ||||| || || || |||||||||| || || |
Sbjct 170 GAGACGCAAGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGAGAGCGTGCG 229
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035
||||| || |||||||| || |||||||| || || |||||||| || || ||
Sbjct 230 ACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGTGGGAT 283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109387168207181
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |