Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq6280 114 1e-19
seq4029 86.0 5e-11
>seq6280
Length=76176
Score = 114 bits (126), Expect = 1e-19
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || || ||||||||||| ||||| ||||| ||||||| ||||| || || ||||
Sbjct 43301 ATGCTGTCATCACTGTACCAGCCTATTTCAATGATGCACAACGGCAAGCAACGAAGGATG 43360
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
| || | ||||| || || | |||||||| | ||||| |||||||| |||||||| |
Sbjct 43361 CCGGTCAAATTGCGGGTCTCGAAGTTCTTCGGGTGATCAACGAACCTACGGCTGCTGCTC 43420
Query 550518 TTGCATATGGACTTGA 550533
|||| ||||| || ||
Sbjct 43421 TTGCCTATGGTCTGGA 43436
>seq4029
Length=68196
Score = 86.0 bits (94), Expect = 5e-11
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566
|| |||||||||||||||||||| || || || ||||| || || ||||| || ||||||
Sbjct 67861 GGCATTCCTCCTGCTCCTCGTGGTGTTCCTCAGATTGAGGTCACCTTCGACATAGATGCC 67802
Query 552567 AATGGAATTTTGAATGTGACTGCTTGTGATAA 552598
|| || || ||||| ||| |||| | ||| ||
Sbjct 67801 AACGGTATCTTGAACGTGTCTGCGTCTGACAA 67770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028944688200070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |