Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 237 3e-57
>seq2220
Length=173857
Score = 237 bits (262), Expect = 3e-57
Identities = 394/566 (70%), Gaps = 5/566 (1%)
Strand=Plus/Plus
Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182
|||||| ||| |||||||| |||||| || || || |||||||||||| |||||||||
Sbjct 62993 AGAGCAAGCAAGCAAAGTCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGGAGA 63052
Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242
| |||||||||||||| || | | ||||||||||| || | || || |||||||
Sbjct 63053 AAGTGAGACCAGGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGATGCAAAGGAGCCAG 63112
Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302
|||||||||| ||||| || || ||||| || | | || | |||| | |
Sbjct 63113 AGAAGAAGATACCCTCGACGGCAGCGAATGCTACCAATCGTTCAGC-AAAGGTGGAACGT 63171
Query 48303 TG-TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCT 48361
|| || | ||||| || |||||||| ||||| ||| | ||| || || |||||
Sbjct 63172 TGATCAGTTATCCACTTCAGTGCCCAGTCGGCCTTGCGCTTAACGCAGGGAATGGTCTCC 63231
Query 48362 ATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTT 48421
||||| ||| || | | || | | | ||| | |||||| || || |
Sbjct 63232 ATGGCATCGAAAAGGTATTCGCGTTGTCTGGGATCCTTGATATAGGTGTCGATGAGGAGT 63291
Query 48422 GCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCC 48481
| ||| |||||||||| | |||||| || || ||||| ||||||||| || |||
Sbjct 63292 GAGTAGGTCTCAGAGTGAATATTCTCCATCATAATTTGGAAACCGTAGAAGCACCGGGCT 63351
Query 48482 TCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCT 48541
|| |||| || || ||||||| | ||| | || || |||||||| || |||||
Sbjct 63352 TCGGCGGCCTGAACCTCATTGGAGAAACGCTCAACGAGGTTTTCATTGACGATGCCATCG 63411
Query 48542 GAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCA 48601
|| ||||| |||||||| || |||||| | ||| ||||||||||||| |||||
Sbjct 63412 GATGCAGCGAAGAAGGCGAGTACATGTGATATGAAGTGGCGCTCGTTGTCATTGAGACGG 63471
Query 48602 T---TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCG 48658
| ||||| | || |||||||| || |||| || || ||||||||||||| ||
Sbjct 63472 TTGGTCCAGTCATGAACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCAGAAGGATGCC 63531
Query 48659 AGTGCTTTTTTGTACATGCCCCATAT 48684
|| || |||||||| ||||||
Sbjct 63532 TCGGCCTTCTTGTACATTTGCCATAT 63557
Score = 156 bits (172), Expect = 8e-33
Identities = 369/557 (66%), Gaps = 3/557 (1%)
Strand=Plus/Minus
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
|| |||||||| |||||| || ||||| || |||||||| |||| ||||| |||
Sbjct 65274 CAAGCAAAGTCTGTGTGCATCCCCTCGTCACGACTGATGAGTTCGTTTGAGAAAGCGAGG 65215
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|| ||||| | || | || |||||||||||| || | |||||||| || || ||||||
Sbjct 65214 CCTGGCATCAATCCACGCTTTTTGAGCCAGAATATAGATGCGAAAGAACCGGAAAAGAAG 65155
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|||||||| || || || || || || | |||| | || | ||||| ||
Sbjct 65154 ATGCCCTCAACAGCAGCAAAAGCAACTAGTCGGGTAGCGAATGTGGCATGTTTGTCAGAT 65095
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370
||||| | ||||||||||||||| ||| | | || || | |||||| || |
Sbjct 65094 ATCCATCGTAACGCCCAGTCTGCCTTGCGCTTAACGGCGGGTATGGACTCTATTGCATCG 65035
Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430
|| || || | |||| | ||| | ||| || || || || ||
Sbjct 65034 AAAAGAAACTGCCGCTCATTGACATCCTTGATGAGGGTGTCGATAAGGAGTGAATAGGTC 64975
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
|| || || | ||||| || ||| ||||||||||| ||| | || || | |
Sbjct 64974 TCGGAATGGATGTTCTCGATCATGATTTGGAACCCGTAAAAGCATCGAGCTTCTGCAATC 64915
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
|| || || | || || | ||| | |||||||||||||||||| || || || |||||
Sbjct 64914 TGAACCTCGTTCGAAAACCGCTCAACCAGATTCTCATTGACTATGCCGTCGGATGCAGCG 64855
Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGT---GAGAGCATTCCAG 48607
||||| || | |||||| | |||||| || || || || | | | |||||||
Sbjct 64854 AAGAAAGCTAAAACATGTGAGATGAAATGACGTTCATTTGAAGTTAGGCGGGTATTCCAG 64795
Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTT 48667
| | ||| || || |||| |||||| | ||||| || || || ||||||
Sbjct 64794 TCGATAATGTCAGTGGAGAGATCCATTTCTTCGGCGGTCCAAAAAGAAGCCTCGGCTTTT 64735
Query 48668 TTGTACATGCCCCATAT 48684
||||||||| ||| ||
Sbjct 64734 TTGTACATGTTCCAAAT 64718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931455447845120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |