Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2220 138 2e-26 >seq2220 Length=173857 Score = 138 bits (152), Expect = 2e-26 Identities = 235/332 (71%), Gaps = 13/332 (4%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || || ||||| | |||||| || ||| || |||||||| ||||| || Sbjct 63021 ACCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATGAGACCGCGTTT 63080 Query 794400 CTTGAGCCAAAAGATG---GCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||| |||||| ||| || | ||| ||||| ||||| ||||||||||| || Sbjct 63081 CTTGAGCCAGAAGATGGATGCAAAGGA---GCCAGAGAAGAAGATACCCTCGACGGCAGC 63137 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516 || | || | || || ||||| ||| | || ||| |||||||||| || Sbjct 63138 GAATGCTACCAATCGTTCAGCAAAGGTGGAACGTTGATC--AGTT-ATCCACTTCAGTGC 63194 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC-GCGAAAGAGGTGGTCCT 794575 ||| || ||||| | | || |||| | || || ||||| ||||| |||| | | Sbjct 63195 CCAGTCGGCCTTGCGCTTAACGCAGGGAATGGTCTCCATGGCATCGAAA-AGGT-ATTCG 63252 Query 794576 TCTCGACCGGG-TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634 | | | ||| ||||||| ||||||||||||||||| ||||||||||| ||||| || Sbjct 63253 CGTTGTCTGGGATCCTTGATATAGGTGTCGATGAGGAGTGAGTAGGTCTCAGAGTGAATA 63312 Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || || || || ||||| || || ||||| Sbjct 63313 TTCTCCATCATAATTTGGAAACCGTAGAAGCA 63344 Score = 105 bits (116), Expect = 1e-16 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 793898 CGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 793957 |||||| | ||| || || ||| |||||| ||||| |||||||| | |||||||| Sbjct 62656 CGCCTTCGAATAATCTGATACACGCTTCTCGAAGAAGTTCGTCTTGCCTTGTAGCGAGAT 62715 Query 793958 CAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGC 794017 || ||||| | ||| || |||| | ||| ||||||| || |||||| | Sbjct 62716 CATGTCCATGAAGTCGAAGGGATTGGTAGAGTTGTACACCTTCTCGTTACCCAGCGACAC 62775 Query 794018 AAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGAT 794077 || | |||||| ||||| || || |||||||||| |||||| |||||||||||| || Sbjct 62776 TAGTAAGCGGTCTGCGACAAACTCGATGTACTGGCGCATGAGCTTGGCGTTCATGCCAAT 62835 Query 794078 GAG 794080 ||| Sbjct 62836 GAG 62838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915539753791277