Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 122 6e-23
seq4824 84.2 1e-11
>seq4212
Length=20478
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| ||||||||||||||| ||||| || || | || | ||
Sbjct 2124 AGGACGAGGTGTAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCT 2065
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| || || |||||||| | || | |||||||||||
Sbjct 2064 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCT 2005
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| |||| | ||| | ||| || || | || || |||
Sbjct 2004 TGGATCTTCGCCTTCACGTTGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTC 1945
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| |||||||||||||| || |||||||||||
Sbjct 1944 TTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 1913
Score = 120 bits (132), Expect = 2e-22
Identities = 157/215 (73%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 34768 GACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTC 34827
||| ||||| | |||||||||||||| || || ||||| || || |||| |||| ||
Sbjct 2350 GACAAGGTGGAGTGTGCTCTCCTTCTGGATATTGTAGTCTGACAGCGTGCGACCATCCTC 2291
Query 34828 CAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTT 34887
|| ||||||||||| |||||||| || ||||| || |||| | ||||||||||| |
Sbjct 2290 AAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTG 2231
Query 34888 TATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGG 34943
|| || ||||| || | ||||| || | ||| || || | || ||||
Sbjct 2230 AATCTTCGCCTTGAC--AT--TGTCGATGGTGTCTGATGACTCCACCTCCAACGTAATGG 2175
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| || |||||||||||||| || || |||||||||
Sbjct 2174 TTTTACCCGTGAGGGTCTTGACGAAAATCTGCATG 2140
Score = 105 bits (116), Expect = 4e-18
Identities = 155/217 (71%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||||| ||| ||| ||||| |||||||| || || || | || ||||
Sbjct 1896 AGAACGAGGTGAAGGGTAGACTCTTTCTGGATGTTATAATCGGACAGCGTACGACCATCC 1837
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||| || || || ||||| | || | |||||||||||
Sbjct 1836 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCAGGAGGAATACCCTCCTTGTCC 1777
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || | ||||| ||| | ||| || || | || ||
Sbjct 1776 TGGATCTTCGCCTTTAC--AT--TGTCGATGGTGTCAGACGACTCCACCTCCAGCGTGAT 1721
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| || |||||||||||||| |||||||||||||||
Sbjct 1720 GGTTTTGCCCGTGAGGGTCTTGACAAAGATCTGCATG 1684
>seq4824
Length=32535
Score = 84.2 bits (92), Expect = 1e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||| |||||||||||||||||| || || || | || ||||
Sbjct 142 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTATAATCTGAGAGCGTACGACCATCT 83
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|||| ||||| || |||||||| || || || || || | || | || ||||||||
Sbjct 82 TCCAACTGCTTCCCTGCGAAGATAAGGCGCTGTTGATCAGGAGGGATGCCTTCCTTGTC 24
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325666431402017
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |