Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2220 95.1 3e-14 >seq2220 Length=173857 Score = 95.1 bits (104), Expect = 3e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 131853 CTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTG 131912 |||| |||| || ||||||||| |||||| || || |||||||| ||| ||||| Sbjct 65118 CTACCCGACTAGTTGCTTTTGCTGCTGTTGAGGGCATCTTCTTTTCCGGTTCTTTCGCAT 65177 Query 131913 CTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCA 131972 |||| || ||||| || ||||||||||||||||| || ||| | || || || || ||| Sbjct 65178 CTATATTCTGGCTCAAAAAGCGTGGATTGATGCCAGGCCTCGCTTTCTCAAACGAACTCA 65237 Query 131973 TCTCGAGAGATGAAGCATTGCATACTGAATTTGCT 132007 || | || || | |||| || || |||||| Sbjct 65238 TCAGTCGTGACGAGGGGATGCACACAGACTTTGCT 65272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186711786282923