Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 116 3e-21
seq1236 104 2e-17
>seq4212
Length=20478
Score = 116 bits (128), Expect = 3e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| |||| | || || |||| || |||||||| || || ||
Sbjct 2104 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCTTCGAGCTGCTTGCCGGCGAA 2045
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | ||||| || ||||||||| |||||| ||||| ||
Sbjct 2044 GATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCA-CGT 1986
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| ||| ||||| |||| |||||||| || ||||| | || || |
Sbjct 1985 TGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTCTTCCCCGTGAGGGTCTTGA 1926
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 1925 CGAAGATCTGCAT 1913
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || || ||||| || | || || || | || || |||||||| ||
Sbjct 2337 GTGCTCTCCTTCTGGATATTGTAGTCTGACAGCGTGCGACCATCCTCAAGCTGCTTTCCG 2278
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
||||| |||| |||||||| |||| || | | |||||||||| ||||| |||
Sbjct 2277 GCAAAGATCAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGAATCTTCGCCTTG 2218
Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719
| | | | | ||||| || |||||||||| ||| || ||||||||||| | ||
Sbjct 2217 ACATTGTCGATGGTGTCTGATGACTCCACCTCCAACGTAATGGTTTTACCCGTGAGGGTC 2158
Query 35720 TTCACAAATATCTGCAT 35736
|| || || ||||||||
Sbjct 2157 TTGACGAAAATCTGCAT 2141
>seq1236
Length=761
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| |||| |||||| || ||||| || | || || ||||||| ||||| | ||||||
Sbjct 6 TCTTCCAACTGCTTTCCAGCAAAGATGAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTA 65
Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701
||| ||||||| ||| | | | | | |||||| || || ||||||| ||||||
Sbjct 66 TCCTGGATCTTTGCCTTAACATTGTCGATAGTGTCGGATGACTCTACCTCCAACGTGATG 125
Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||||||| | ||||| ||||| ||||||||
Sbjct 126 GTTTTACCCGTGAGGGTTTTGACAAAGATCTGCAT 160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450756167226440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |