Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4212 116 3e-21 seq1236 104 2e-17 >seq4212 Length=20478 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | || || |||| || |||||||| || || || Sbjct 2104 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCTTCGAGCTGCTTGCCGGCGAA 2045 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||||| || ||||||||| |||||| ||||| || Sbjct 2044 GATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTCGCCTTCA-CGT 1986 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||| ||||| |||| |||||||| || ||||| | || || | Sbjct 1985 TGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTCTTCCCCGTGAGGGTCTTGA 1926 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 1925 CGAAGATCTGCAT 1913 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || || ||||| || | || || || | || || |||||||| || Sbjct 2337 GTGCTCTCCTTCTGGATATTGTAGTCTGACAGCGTGCGACCATCCTCAAGCTGCTTTCCG 2278 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| |||| |||||||| |||| || | | |||||||||| ||||| ||| Sbjct 2277 GCAAAGATCAGACGCTGCTGATCCGGCGGGATACCCTCCTTGTCCTGAATCTTCGCCTTG 2218 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||| || |||||||||| ||| || ||||||||||| | || Sbjct 2217 ACATTGTCGATGGTGTCTGATGACTCCACCTCCAACGTAATGGTTTTACCCGTGAGGGTC 2158 Query 35720 TTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 2157 TTGACGAAAATCTGCAT 2141 >seq1236 Length=761 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || |||| |||||| || ||||| || | || || ||||||| ||||| | |||||| Sbjct 6 TCTTCCAACTGCTTTCCAGCAAAGATGAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTA 65 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| ||||||| ||| | | | | | |||||| || || ||||||| |||||| Sbjct 66 TCCTGGATCTTTGCCTTAACATTGTCGATAGTGTCGGATGACTCTACCTCCAACGTGATG 125 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||||||| | ||||| ||||| |||||||| Sbjct 126 GTTTTACCCGTGAGGGTTTTGACAAAGATCTGCAT 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450756167226440