Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 125 7e-24
seq6241 89.7 5e-13
>seq4212
Length=20478
Score = 125 bits (138), Expect = 7e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||||||||| ||||| ||||| ||||||||||||||| || || || ||| |||
Sbjct 2121 ACGAGGTGTAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCTTCG 2062
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| || || || | |||||||| ||||| || ||||| || || |||||
Sbjct 2061 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGG 2002
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | ||||| ||||| ||||| || | || || || ||
Sbjct 2001 ATCTTCGCCTTCACGTTGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTCTTC 1942
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || ||||| || |||||
Sbjct 1941 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1913
Score = 122 bits (134), Expect = 9e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|| || || || ||||| || ||| ||||| || || |||||||| | || || || |
Sbjct 2358 AGACGTAAGACAAGGTGGAGTGTGCTCTCCTTCTGGATATTGTAGTCTGACAGCG-TGCG 2300
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
| || || ||||| || || ||||| |||| |||||||||||| ||||| || || ||
Sbjct 2299 ACCATCCTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATACCCTC 2240
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || ||||| || ||||| ||| | ||||| || || ||||| || | ||
Sbjct 2239 CTTGTCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCCAACGT 2180
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||||||| || | || || |||||||| |||||
Sbjct 2179 AATGGTTTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 2141
>seq6241
Length=43505
Score = 89.7 bits (98), Expect = 5e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || | ||| || |||||||||||||| ||||||||||||| |
Sbjct 25935 CCACCACGGAGGCGGAGGACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTA 25876
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || |||||||| || ||||| || |||| ||||||||| ||||| ||
Sbjct 25875 AGAGTACGGCCATCCTCGAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGG 25816
Query 134607 ATGC 134610
||||
Sbjct 25815 ATGC 25812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505356432980360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |