Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4212 125 7e-24 seq6241 89.7 5e-13 >seq4212 Length=20478 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||||||||| ||||| ||||| ||||||||||||||| || || || ||| ||| Sbjct 2121 ACGAGGTGTAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCTTCG 2062 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || || | |||||||| ||||| || ||||| || || ||||| Sbjct 2061 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGG 2002 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| ||||| ||||| || | || || || || Sbjct 2001 ATCTTCGCCTTCACGTTGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTCTTC 1942 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 1941 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1913 Score = 122 bits (134), Expect = 9e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || || || || ||||| || ||| ||||| || || |||||||| | || || || | Sbjct 2358 AGACGTAAGACAAGGTGGAGTGTGCTCTCCTTCTGGATATTGTAGTCTGACAGCG-TGCG 2300 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || ||||| || || ||||| |||| |||||||||||| ||||| || || || Sbjct 2299 ACCATCCTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCCGGCGGGATACCCTC 2240 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || ||||| || ||||| ||| | ||||| || || ||||| || | || Sbjct 2239 CTTGTCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCCAACGT 2180 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||||||| || | || || |||||||| ||||| Sbjct 2179 AATGGTTTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 2141 >seq6241 Length=43505 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || |||||||||||||| ||||||||||||| | Sbjct 25935 CCACCACGGAGGCGGAGGACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGCTA 25876 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || |||||||| || ||||| || |||| ||||||||| ||||| || Sbjct 25875 AGAGTACGGCCATCCTCGAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGG 25816 Query 134607 ATGC 134610 |||| Sbjct 25815 ATGC 25812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505356432980360