Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2220 91.5 5e-13 >seq2220 Length=173857 Score = 91.5 bits (100), Expect = 5e-13 Identities = 115/157 (73%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 |||||||| |||||||||| || || || | || ||| ||| |||| || || || Sbjct 65123 CGACTAGTTGCTTTTGCTGCTGTTGAGGGCATCTTCTTTTCCGGTT-CTTTCGCATCTAT 65181 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 |||||| | |||||||||||| | |||| || || | || |||||||| ||||| Sbjct 65182 ATTCTGGCTCAAAAAGCGTGGATTGATGCCAGGCCTCGCTTTCTCAAACGAACTCATCAG 65241 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTT 443865 ||| |||||||| |||| ||||| || |||||| Sbjct 65242 TCGTGACGAGGGGATGCACACAGACTTTGCTTGTCTT 65278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588200811263135