Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 91.5 5e-13
>seq2220
Length=173857
Score = 91.5 bits (100), Expect = 5e-13
Identities = 115/157 (73%), Gaps = 1/157 (1%)
Strand=Plus/Plus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|||||||| |||||||||| || || || | || ||| ||| |||| || || ||
Sbjct 65123 CGACTAGTTGCTTTTGCTGCTGTTGAGGGCATCTTCTTTTCCGGTT-CTTTCGCATCTAT 65181
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
|||||| | |||||||||||| | |||| || || | || |||||||| |||||
Sbjct 65182 ATTCTGGCTCAAAAAGCGTGGATTGATGCCAGGCCTCGCTTTCTCAAACGAACTCATCAG 65241
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTT 443865
||| |||||||| |||| ||||| || ||||||
Sbjct 65242 TCGTGACGAGGGGATGCACACAGACTTTGCTTGTCTT 65278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588200811263135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |