Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4642 84.2 3e-11 >seq4642 Length=14046 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/198 (70%), Gaps = 11/198 (6%) Strand=Plus/Plus Query 111619 CTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGG 111678 ||| || | ||| ||||| | ||| || ||||| || | | ||| | ||||||||| Sbjct 9924 CTCCTCTTTACCGTGGTTCTTCCTTAAGTCCAGGAAATCAAATACATCAGGGTGCCATGG 9983 Query 111679 CTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCG 111732 |||||| || | |||| | |||| ||||| ||| |||||| ||||| || Sbjct 9984 CTCAAGGTAAATAGCGAAGGCTCCC---GGACGCTTGTTGCCACCTTGATCGACATAACG 10040 Query 111733 CGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG-TCC 111791 || ||||||| | || | || ||||| |||| |||||| | ||| | ||||||| ||| Sbjct 10041 TGCGGTGGCGTCATATGCACGGAGCATAGGAACAATACCGTTTGAGTAGCCATTTGTTCC 10100 Query 111792 CCCGA-ATACGAGATTTA 111808 ||| |||||| |||| Sbjct 10101 AGCGATATACGATCTTTA 10118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627979849792800