Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2220 129 7e-25 >seq2220 Length=173857 Score = 129 bits (142), Expect = 7e-25 Identities = 349/525 (66%), Gaps = 17/525 (3%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||| |||||| |||||| || || ||||| ||||| Sbjct 63004 GCAAAGTCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTGAGACCA 63063 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| || ||||| | |||||| || | ||| ||||||||||||||||| Sbjct 63064 GGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGATGCAAAGGAGCCAGAGAAGAAGATA 63123 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA--- 130192 ||||| || ||||| || | | || ||||||||| | || || ||| |||| Sbjct 63124 CCCTCGACGGCAGCGAATGCTACCAATCGTTCAGCAAAG--GTGGAACGTTG-ATCAGTT 63180 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | |||||||| ||||| | ||||| || | || || | ||||| || || || Sbjct 63181 ATCCACTTCAGTGCCCAGTCGGCCTTGCGCTTAACGCAGGGAATGGTCTCCATGGCATCG 63240 Query 130253 AAGAGTTCCTTC---TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 130309 || || | ||| || |||| ||||| ||||| || | || ||||| ||| || Sbjct 63241 AAAAGGT-ATTCGCGTTGTCTG--GGATCCTTGATATAGGTGTCGATGAGGAGTGAGTAG 63297 Query 130310 GTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 130368 || || || | | | ||| || || || ||||||| | || |||||| Sbjct 63298 GTCTCAGAGTGAATATTCTCCATCATAATTTGGAAAC-CGTAGAAGCACCGGGCTTCGGC 63356 Query 130369 TATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 130428 ||| ||||||| | ||| | | || || ||| || || |||||||| | Sbjct 63357 GGCCTGAACCTCATTGGAGAAACGCTCAACGAGGTTTTCATTGACGATGCCATCGGATGC 63416 Query 130429 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 130485 ||| || || || || | || |||||| | | || || || || | || | | Sbjct 63417 AGCGAAGAAGGCGAGTACATGTGATATGAAGTGGCGCTCGTTGTCATTGAGACGGTTGGT 63476 Query 130486 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||| | || || || |||||||| | |||||| |||||||| Sbjct 63477 CCAGTCATGAACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCA 63521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618383846687080