Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2220 129 7e-25
>seq2220
Length=173857
Score = 129 bits (142), Expect = 7e-25
Identities = 349/525 (66%), Gaps = 17/525 (3%)
Strand=Plus/Plus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| | |||||| |||||| |||||| || || ||||| |||||
Sbjct 63004 GCAAAGTCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTGGAGAAAGTGAGACCA 63063
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||||||||| || ||||| | |||||| || | ||| |||||||||||||||||
Sbjct 63064 GGCATGAGACCGCGTTTCTTGAGCCAGAAGATGGATGCAAAGGAGCCAGAGAAGAAGATA 63123
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA--- 130192
||||| || ||||| || | | || ||||||||| | || || ||| ||||
Sbjct 63124 CCCTCGACGGCAGCGAATGCTACCAATCGTTCAGCAAAG--GTGGAACGTTG-ATCAGTT 63180
Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252
| |||||||| ||||| | ||||| || | || || | ||||| || || ||
Sbjct 63181 ATCCACTTCAGTGCCCAGTCGGCCTTGCGCTTAACGCAGGGAATGGTCTCCATGGCATCG 63240
Query 130253 AAGAGTTCCTTC---TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 130309
|| || | ||| || |||| ||||| ||||| || | || ||||| ||| ||
Sbjct 63241 AAAAGGT-ATTCGCGTTGTCTG--GGATCCTTGATATAGGTGTCGATGAGGAGTGAGTAG 63297
Query 130310 GTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 130368
|| || || | | | ||| || || || ||||||| | || ||||||
Sbjct 63298 GTCTCAGAGTGAATATTCTCCATCATAATTTGGAAAC-CGTAGAAGCACCGGGCTTCGGC 63356
Query 130369 TATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 130428
||| ||||||| | ||| | | || || ||| || || |||||||| |
Sbjct 63357 GGCCTGAACCTCATTGGAGAAACGCTCAACGAGGTTTTCATTGACGATGCCATCGGATGC 63416
Query 130429 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 130485
||| || || || || | || |||||| | | || || || || | || | |
Sbjct 63417 AGCGAAGAAGGCGAGTACATGTGATATGAAGTGGCGCTCGTTGTCATTGAGACGGTTGGT 63476
Query 130486 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|||||| | || || || |||||||| | |||||| ||||||||
Sbjct 63477 CCAGTCATGAACGTCTTTTGAGAGATCCATCTCCTCAGCAGTCCA 63521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618383846687080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |