Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11-
18] 6,643 sequences; 43,780,879 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 118 9e-22
seq4824 89.7 4e-13
>seq4212
Length=20478
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || || ||| | || || | |||||||| ||||
Sbjct 1913 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACATTGGAAGTGGAGTCGTCT 1972
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || || || |||||||| || ||||| || ||||| ||
Sbjct 1973 GACACCATAGACAACGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAG 2032
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||||||||| || | |||||| || || ||||||| ||||||
Sbjct 2033 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGTACTCTTTCCGACTACAAC 2092
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || |||| | || | ||| | || || |||||
Sbjct 2093 ATTCAGAAGGAGTCCACTCTACACCTCGTCCTTCGTCTTCGTGGCGGCAT 2142
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 27093 ATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACC 27152
|| |||||||| || |||||| | || | ||| ||||| ||| | || || || |||
Sbjct 1562 ATTCCACCCGACCAGCAGCGTCTCATCTTCGCGGGCAAGCAACTTGAGGATGGTCGGACA 1621
Query 27153 GTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGT 27212
| |||||||||||||| ||||||||||| ||| | || ||||| |||||| | || ||
Sbjct 1622 CTCTCCGATTACAACATCCAAAAGGAGTCTACCCTTCACTTGGTCTTGCGTCTCCGTGGA 1681
Query 27213 GGCAT 27217
|||||
Sbjct 1682 GGCAT 1686
>seq4824
Length=32535
Score = 89.7 bits (98), Expect = 4e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||| ||||| |||||||| || || ||||||||||| | || | ||| || ||
Sbjct 15 AAGATTCAGGACAAGGAAGGCATCCCTCCTGATCAACAGCGCCTTATCTTCGCAGGGAAG 74
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| |||||||| || || | || ||||| |||||||| |||||||| ||| | ||
Sbjct 75 CAGTTGGAAGATGGTCGTACGCTCTCAGATTATAACATTCAGAAGGAGTCCACCCTTCAC 134
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGC 27215
| || | ||| | || ||||||
Sbjct 135 CTCGTCCTCCGTCTTCGTGGTGGC 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434882285463360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |