Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4212 118 9e-22 seq4824 89.7 4e-13 >seq4212 Length=20478 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| | || || | |||||||| |||| Sbjct 1913 ATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACATTGGAAGTGGAGTCGTCT 1972 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || |||||||| || ||||| || ||||| || Sbjct 1973 GACACCATAGACAACGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCTCCCGACCAG 2032 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | |||||| || || ||||||| |||||| Sbjct 2033 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGTACTCTTTCCGACTACAAC 2092 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || |||| | || | ||| | || || ||||| Sbjct 2093 ATTCAGAAGGAGTCCACTCTACACCTCGTCCTTCGTCTTCGTGGCGGCAT 2142 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27093 ATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACC 27152 || |||||||| || |||||| | || | ||| ||||| ||| | || || || ||| Sbjct 1562 ATTCCACCCGACCAGCAGCGTCTCATCTTCGCGGGCAAGCAACTTGAGGATGGTCGGACA 1621 Query 27153 GTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGT 27212 | |||||||||||||| ||||||||||| ||| | || ||||| |||||| | || || Sbjct 1622 CTCTCCGATTACAACATCCAAAAGGAGTCTACCCTTCACTTGGTCTTGCGTCTCCGTGGA 1681 Query 27213 GGCAT 27217 ||||| Sbjct 1682 GGCAT 1686 >seq4824 Length=32535 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || ||||| ||||| |||||||| || || ||||||||||| | || | ||| || || Sbjct 15 AAGATTCAGGACAAGGAAGGCATCCCTCCTGATCAACAGCGCCTTATCTTCGCAGGGAAG 74 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || |||||||| || || | || ||||| |||||||| |||||||| ||| | || Sbjct 75 CAGTTGGAAGATGGTCGTACGCTCTCAGATTATAACATTCAGAAGGAGTCCACCCTTCAC 134 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGC 27215 | || | ||| | || |||||| Sbjct 135 CTCGTCCTCCGTCTTCGTGGTGGC 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434882285463360