Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq4212 116 9e-21 >seq4212 Length=20478 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || ||||| ||||| || || |||||||| |||| | ||| | || ||| Sbjct 2124 AGGACGAGGTGTAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCGTCT 2065 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||| | | || || ||||| ||| Sbjct 2064 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCT 2005 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | |||| | |||| || ||| ||||| | || || || Sbjct 2004 TGGATCTTCGCCTTCACGTTGTCTATGGTGTCAGACGACTCCACTTCCAATGTGATCGTC 1945 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||||| |||||| Sbjct 1944 TTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 1913 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| ||||||||||| |||||||| ||||||| | || | ||||| Sbjct 1896 AGAACGAGGTGAAGGGTAGACTCTTTCTGGATGTTATAATCGGACAGCGTACGACCATCC 1837 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | ||| ||||| | | || || ||||| || Sbjct 1836 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCAGGAGGAATACCCTCCTTGTCC 1777 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | | |||| || ||| || || || || || ||| Sbjct 1776 TGGATCTTCGCCTTTACATTGTCGATGGTGTCAGACGACTCCACCTCCAGCGTGATGGTT 1717 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| || |||| |||||| Sbjct 1716 TTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 1685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153722594345453