Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopogon_20vesiculosus_20[genbank_20GCA_5F001882365.1_202016-11- 18] 6,643 sequences; 43,780,879 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2220 111 2e-19 >seq2220 Length=173857 Score = 111 bits (122), Expect = 2e-19 Identities = 310/472 (66%), Gaps = 8/472 (2%) Strand=Plus/Minus Query 23498 TAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAG 23557 |||| || | ||| ||||| || || | || || || | ||| || | ||| || | Sbjct 65285 TAAATAAAAGACAAGCAAAGTCTGTGTGCATCCCCTCGTCACGACTGATGAGTTCGTTTG 65226 Query 23558 AAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATC 23617 | || | | |||||||| ||||| || ||||| | ||| ||||| | || || || | Sbjct 65225 AGAAAGCGAGGCCTGGCATCAATCCACGCTTTTTGAGCCAGAATATAGATGCGAAAGAAC 65166 Query 23618 CGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCAT 23677 |||||||||| || ||||||||||| ||||| || || || || ||| | ||||| |||| Sbjct 65165 CGGAAAAGAAGATGCCCTCAACAGCAGCAAAAGCAACTAGTCGGGTAGCGAATGTGGCAT 65106 Query 23678 TATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTT 23737 | ||||| |||||| | | ||| | ||||| || || || | | Sbjct 65105 GTTTGTCAGATATCCATCGTAACGCCCAGTCTGCCTTGCGCTTAACGGCGGGTATGGACT 65046 Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGTTATATATGTATCAATTA 23794 | ||||| | || ||||| | ||||| ||| | || || || || | Sbjct 65045 CTATTGCATCGAAAAGAAA---CTGCCGCTCATTGACATCCTTGATGAGGGTGTCGATAA 64989 Query 23795 GTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATC 23854 | | ||| | || ||||| || || || || || || ||||| ||||| |||| Sbjct 64988 GGAGTGAATAGGTCTCGGAATGGATGTTCTCGATCATGATTTGGAACCCGTAAAAGCATC 64929 Query 23855 TAGCTTCAGACAAT-TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATA 23913 |||||| | |||| ||||| || || |||| | | | | | ||| || || || || Sbjct 64928 GAGCTTCTG-CAATCTGAACCTCGTTCGAAAACCGCTCAACCAGATTCTCATTGACTATG 64870 Query 23914 CCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCAT 23965 || || ||||| |||||||| | ||||| | || ||||| | ||||| Sbjct 64869 CCGTCGGATGCAGCGAAGAAAGCTAAAACATGTGAGATGAAATGACGTTCAT 64818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521444696940200