Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq64 105 7e-18 >seq64 Length=12022 Score = 105 bits (116), Expect = 7e-18 Identities = 128/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 17012 GAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGAC 17071 ||||| ||||| ||||||||| || || ||||| | |||||| || | ||||||||| Sbjct 6165 GAAAAGGTCAAGCCGGGCATCAGCCCGCGCTTCTTGAGCCAAAAGATGGACGCGAACGAC 6106 Query 17072 CCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCG 17131 || || || ||||| |||||||| | ||| |||||||| | ||||||| || || || Sbjct 6105 CCGGAGAAAAATATGCCCTCGACCGCTGCGAACGCGATGAGTCGTTCGCCGAACACTGCC 6046 Query 17132 TCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAA 17182 | | | | || |||||| | | |||| |||||||| | ||| |||||| Sbjct 6045 T-TCGGATCAGAGATCCATCGCAACGCCCAGTCGGCTTTCTTCTTGATGCAA 5995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517538910723120