Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq327 109 6e-19 >seq327 Length=49259 Score = 109 bits (120), Expect = 6e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 145664 TCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 145723 |||| | || ||| || ||| ||||| ||||||| |||||||||||| ||||| || | Sbjct 24165 TCCTCGCGAGTTGGGTCTGCAGCGGCTCAACGTGGTCGAGGTAGACGTGGGCGTCTCCGA 24224 Query 145724 GGACGTGGATGAAGTCCC-CGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGC 145782 | | |||| || || |||| || | | |||| | | |||| ||||| ||||| Sbjct 24225 GCTGGAGGATAAACTCGTGCGGGACCGTGTCG-GTGACGAGTGCGATCATGTGCGTCAGA 24283 Query 145783 AGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTAC 145842 |||| ||| || ||||||||||| || || || || | ||| ||||||| |||||| Sbjct 24284 AGGGCGTACGAAGCGATGTTGAAGGGGACACCGAGTCCGAGGTCGGCCGAGCGTTGGTAC 24343 Query 145843 AGCTGGCAGGAGAG 145856 | | |||||||||| Sbjct 24344 ATCAGGCAGGAGAG 24357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590069173257360