Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02-
24] 1,034 sequences; 19,981,819 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq985 93.3 8e-14
>seq985
Length=76026
Score = 93.3 bits (102), Expect = 8e-14
Identities = 175/255 (69%), Gaps = 2/255 (1%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || || |||||||||||||||| || ||| || || || || || ||
Sbjct 18825 CCGATCCCGCCCGCAGTCTTGGAGATGAGCGCGCAAGTCTTGAGCGTGTCGTAGATGCCT 18884
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG-GGGTGTGACTGT 94904
|| || || || || | | | |||||||| || || ||||| ||||| | ||
Sbjct 18885 TCGATCGAGTCGTCCTGCATGGTGACGAGGAAGCAGGACGAGAGTTGCGGGTG-GGGGGT 18943
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
|| || ||||| ||||| || || || || || ||| || |||||| | | ||
Sbjct 18944 ACCGGCGTTGAACAGCGTGGGCGACGCGTGAGTGAAGTAGCGCTCCGACATCAAGTTGTA 19003
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
|| || || || |||||||| | |||||| |||||||| || || ||||| | |||
Sbjct 19004 GGTCTCGATAGCACGCTTGATGTCGGGTCCGTGGATGCCGACGGCAACGCGCATGAGCAT 19063
Query 95025 GTCCTGAGGGCGCTC 95039
|| |||||| |||||
Sbjct 19064 GTGCTGAGGACGCTC 19078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989570889867470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |