Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20mucilaginosa_20[genbank_20GCA_5F000931965.1_202015-02- 24] 1,034 sequences; 19,981,819 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq93 98.7 7e-16 >seq93 Length=41911 Score = 98.7 bits (108), Expect = 7e-16 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 33541 GTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCGTT- 33599 ||||||||| |||| || ||||| || ||||| |||||||||||||| || Sbjct 3462 GTCAAGATCCGCGTGCGTTCGACCCGCATTCCCGAGATTGGCGACAAGTTTGCGTCTCGA 3521 Query 33600 CACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGC 33659 ||||| | ||||||| ||| ||| || | |||| || |||||||||||| |||| Sbjct 3522 CACGGTC-AGAAGGGAACGATCGGTATCACGTACCGTCACGAGGACATGCCGTTTTCGGC 3580 Query 33660 CGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACG 33717 ||| ||| | || ||| | ||||||||||||| || | || |||||||||||| Sbjct 3581 CGAGGGCATCACGCCCGACTTGATCATCAACCCGCACGCCATTCCGTCGCGCATGACG 3638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356229110788702